Experiment: KLEB1 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15565 and BWI76_RS15570 are separated by 78 nucleotides BWI76_RS15570 and BWI76_RS15575 are separated by 67 nucleotides BWI76_RS15575 and BWI76_RS15580 overlap by 11 nucleotides BWI76_RS15580 and BWI76_RS15585 are separated by 112 nucleotides BWI76_RS15585 and BWI76_RS15590 are separated by 182 nucleotides
BWI76_RS15565: BWI76_RS15565 - hypothetical protein, at 3,260,578 to 3,260,790
_RS15565
BWI76_RS15570: BWI76_RS15570 - phage antirepressor Ant, at 3,260,869 to 3,261,642
_RS15570
BWI76_RS15575: BWI76_RS15575 - hypothetical protein, at 3,261,710 to 3,262,429
_RS15575
BWI76_RS15580: BWI76_RS15580 - putative transcriptional repressor arc (modular protein), at 3,262,419 to 3,262,592
_RS15580
BWI76_RS15585: BWI76_RS15585 - DNA-binding protein, at 3,262,705 to 3,263,067
_RS15585
BWI76_RS15590: BWI76_RS15590 - hypothetical protein, at 3,263,250 to 3,263,957
_RS15590
Position (kb)
3261
3262
3263 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3260.741 kb on - strand, within BWI76_RS15565 at 3260.741 kb on - strand, within BWI76_RS15565 at 3260.842 kb on - strand at 3260.854 kb on + strand at 3260.867 kb on + strand at 3260.875 kb on - strand at 3260.929 kb on - strand at 3261.039 kb on - strand, within BWI76_RS15570 at 3261.283 kb on - strand, within BWI76_RS15570 at 3261.526 kb on + strand, within BWI76_RS15570 at 3261.534 kb on - strand, within BWI76_RS15570 at 3261.747 kb on - strand at 3261.755 kb on + strand at 3262.170 kb on - strand, within BWI76_RS15575 at 3262.267 kb on + strand, within BWI76_RS15575 at 3262.308 kb on - strand, within BWI76_RS15575 at 3262.338 kb on - strand, within BWI76_RS15575 at 3262.341 kb on - strand, within BWI76_RS15575 at 3262.400 kb on + strand at 3262.408 kb on - strand at 3262.702 kb on + strand at 3263.301 kb on + strand at 3263.403 kb on + strand, within BWI76_RS15590
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB1 MOI 0.1 remove 3,260,741 - BWI76_RS15565 0.77 +0.1 3,260,741 - BWI76_RS15565 0.77 -1.3 3,260,842 - -3.0 3,260,854 + -1.5 3,260,867 + -1.3 3,260,875 - -0.1 3,260,929 - -1.8 3,261,039 - BWI76_RS15570 0.22 -1.0 3,261,283 - BWI76_RS15570 0.53 -0.9 3,261,526 + BWI76_RS15570 0.85 -3.9 3,261,534 - BWI76_RS15570 0.86 -1.3 3,261,747 - -0.9 3,261,755 + -1.9 3,262,170 - BWI76_RS15575 0.64 -1.7 3,262,267 + BWI76_RS15575 0.77 -1.3 3,262,308 - BWI76_RS15575 0.83 -1.0 3,262,338 - BWI76_RS15575 0.87 -3.8 3,262,341 - BWI76_RS15575 0.88 -1.3 3,262,400 + +1.4 3,262,408 - +1.0 3,262,702 + -2.6 3,263,301 + -1.0 3,263,403 + BWI76_RS15590 0.22 -0.4
Or see this region's nucleotide sequence