Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06625

Experiment: KLEB1 MOI 0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB1 MOI 0.1
1,391,966	+				+2.2
1,392,002	+				-1.0
1,392,002	+				-0.2
1,392,038	-				-2.6
1,392,043	+				+0.1
1,392,043	+				-1.0
1,392,043	+				-1.9
1,392,043	+				-0.0
1,392,043	+				+0.3
1,392,043	+				+0.8
1,392,043	+				-1.0
1,392,043	+				-0.1
1,392,043	+				-1.7
1,392,044	+				-0.1
1,392,050	+				+0.0
1,392,050	+				-2.3
1,392,050	+				+2.3
1,392,050	+				+1.3
1,392,050	+				-2.2
1,392,050	+				-1.2
1,392,050	+				-0.3
1,392,050	+				+1.7
1,392,050	+				+1.1
1,392,050	+				-3.0
1,392,050	+				-1.4
1,392,050	+				+0.7
1,392,050	+				-0.3
1,392,050	+				-1.7
1,392,050	+				+1.3
1,392,050	+				-1.7
1,392,050	+				-1.0
1,392,050	+				+0.3
1,392,050	+				+1.3
1,392,050	+				+0.6
1,392,050	+				+1.3
1,392,050	+				+2.3
1,392,050	+				-2.9
1,392,050	+				+0.4
1,392,050	+				-1.0
1,392,050	+				+1.5
1,392,050	+				-1.0
1,392,050	+				-2.0
1,392,050	+				+0.7
1,392,050	+				+0.4
1,392,051	+				-1.3
1,392,051	-				+0.4
1,392,051	-				-0.2
1,392,051	-				+0.2
1,392,051	-				-0.3
1,392,051	-				-1.7
1,392,056	+				-0.7
1,392,056	+				+0.3
1,392,056	+				-0.1
1,392,056	+				-1.4
1,392,056	+				-3.4
1,392,056	+				+0.2
1,392,058	-				+0.0
1,392,058	-				-0.5
1,392,058	-				+0.3
1,392,058	-				+0.4
1,392,058	-				+1.6
1,392,058	-				+0.3
1,392,058	-				+1.0
1,392,058	-				-1.5
1,392,058	-				-1.8
1,392,058	-				-1.3
1,392,058	-				-0.2
1,392,058	-				-0.3
1,392,058	-				+1.3
1,392,058	-				-0.9
1,392,058	-				-3.5
1,392,058	-				+0.2
1,392,058	-				-1.3
1,392,058	-				-0.7
1,392,058	-				-0.7
1,392,058	-				+1.3
1,392,058	-				-0.9
1,392,058	-				-0.7
1,392,058	-				-0.1
1,392,058	-				-2.0
1,392,058	-				-1.1
1,392,058	-				-3.7
1,392,058	-				-3.0
1,392,058	-				+0.3
1,392,058	-				+0.0
1,392,058	-				-1.2
1,392,058	-				-0.5
1,392,058	-				-2.7
1,392,058	-				+1.3
1,392,058	-				-1.7
1,392,058	-				-2.5
1,392,058	-				-0.5
1,392,058	-				-0.7
1,392,058	-				-1.0
1,392,058	-				+0.5
1,392,058	-				+0.9
1,392,058	-				-0.9
1,392,059	-				-1.5
1,392,059	-				-0.5
1,392,059	-				-0.4
1,392,064	-				-1.3
1,392,064	-				+0.9
1,392,064	-				-0.3
1,392,064	-				-2.8
1,392,064	-				-0.0
1,392,064	-				-1.4
1,392,064	-				+0.0
1,392,064	-				-0.9
1,392,110	+		BWI76_RS06620	0.14	-1.3
1,392,110	+		BWI76_RS06620	0.14	+0.4
1,392,112	-		BWI76_RS06620	0.14	+0.9
1,392,135	+		BWI76_RS06620	0.16	-1.2
1,392,135	+		BWI76_RS06620	0.16	-1.3
1,392,135	+		BWI76_RS06620	0.16	-3.4
1,392,135	+		BWI76_RS06620	0.16	-0.4
1,392,135	+		BWI76_RS06620	0.16	-1.7
1,392,140	+		BWI76_RS06620	0.17	+0.0
1,392,140	+		BWI76_RS06620	0.17	-4.5
1,392,143	-		BWI76_RS06620	0.17	-1.7
1,392,143	-		BWI76_RS06620	0.17	-0.3
1,392,143	-		BWI76_RS06620	0.17	-0.3
1,392,148	-		BWI76_RS06620	0.18	-0.7
1,392,160	-		BWI76_RS06620	0.19	+0.2
1,392,203	+		BWI76_RS06620	0.24	+1.3
1,392,213	-		BWI76_RS06620	0.25	-1.3
1,392,220	+		BWI76_RS06620	0.25	+0.7
1,392,238	-		BWI76_RS06620	0.27	-0.3
1,392,243	+		BWI76_RS06620	0.28	-2.2
1,392,243	+		BWI76_RS06620	0.28	+1.5
1,392,243	+		BWI76_RS06620	0.28	-1.3
1,392,243	+		BWI76_RS06620	0.28	-0.2
1,392,243	+		BWI76_RS06620	0.28	-2.8
1,392,245	+		BWI76_RS06620	0.28	-3.6
1,392,251	-		BWI76_RS06620	0.29	+1.6
1,392,253	+		BWI76_RS06620	0.29	-0.1
1,392,255	+		BWI76_RS06620	0.29	+1.0
1,392,255	+		BWI76_RS06620	0.29	+0.7
1,392,269	+		BWI76_RS06620	0.31	+0.1
1,392,269	+		BWI76_RS06620	0.31	-0.1
1,392,269	+		BWI76_RS06620	0.31	+0.5
1,392,269	+		BWI76_RS06620	0.31	-1.0
1,392,277	-		BWI76_RS06620	0.32	-0.4
1,392,412	+		BWI76_RS06620	0.46	-0.5
1,392,423	+		BWI76_RS06620	0.47	-1.4
1,392,500	+		BWI76_RS06620	0.55	+0.4
1,392,500	+				-1.9
1,392,500	+		BWI76_RS06620	0.55	+0.1
1,392,500	+		BWI76_RS06620	0.55	-1.7
1,392,500	+		BWI76_RS06620	0.55	+1.0
1,392,500	+		BWI76_RS06620	0.55	-1.2
1,392,500	+		BWI76_RS06620	0.55	+0.3
1,392,500	+		BWI76_RS06620	0.55	-1.7
1,392,500	+		BWI76_RS06620	0.55	+1.3
1,392,500	+		BWI76_RS06620	0.55	+0.2
1,392,500	+		BWI76_RS06620	0.55	-3.5
1,392,500	+		BWI76_RS06620	0.55	-1.1
1,392,500	+		BWI76_RS06620	0.55	-1.0
1,392,500	+		BWI76_RS06620	0.55	-1.3
1,392,500	+		BWI76_RS06620	0.55	-0.1
1,392,500	+		BWI76_RS06620	0.55	-4.2
1,392,500	+		BWI76_RS06620	0.55	+0.9
1,392,500	+		BWI76_RS06620	0.55	-1.0
1,392,500	+		BWI76_RS06620	0.55	-0.6
1,392,500	+		BWI76_RS06620	0.55	-0.7
1,392,500	+		BWI76_RS06620	0.55	+0.4
1,392,500	+		BWI76_RS06620	0.55	-1.0
1,392,500	+		BWI76_RS06620	0.55	+0.6
1,392,500	+		BWI76_RS06620	0.55	+0.2
1,392,500	+		BWI76_RS06620	0.55	-2.4
1,392,500	+		BWI76_RS06620	0.55	+1.0
1,392,500	+		BWI76_RS06620	0.55	+1.1
1,392,500	+		BWI76_RS06620	0.55	-1.1
1,392,500	+		BWI76_RS06620	0.55	+0.6
1,392,500	+		BWI76_RS06620	0.55	-0.3
1,392,500	+		BWI76_RS06620	0.55	-3.0
1,392,508	+		BWI76_RS06620	0.56	-1.3
1,392,508	-				+0.3
1,392,508	-		BWI76_RS06620	0.56	+0.3
1,392,508	-		BWI76_RS06620	0.56	-0.1
1,392,508	-		BWI76_RS06620	0.56	+0.4
1,392,508	-		BWI76_RS06620	0.56	-0.5
1,392,508	-		BWI76_RS06620	0.56	-0.3
1,392,508	-		BWI76_RS06620	0.56	-1.7
1,392,508	-		BWI76_RS06620	0.56	+1.1
1,392,508	-		BWI76_RS06620	0.56	+0.3
1,392,510	+		BWI76_RS06620	0.56	-0.0
1,392,510	+		BWI76_RS06620	0.56	-0.4
1,392,571	+		BWI76_RS06620	0.63	+0.6
1,392,573	+		BWI76_RS06620	0.63	-0.9
1,392,573	+		BWI76_RS06620	0.63	-0.4
1,392,581	+		BWI76_RS06620	0.64	-0.1
1,392,581	-		BWI76_RS06620	0.64	-0.7
1,392,581	-		BWI76_RS06620	0.64	-0.7
1,392,581	-		BWI76_RS06620	0.64	-0.9
1,392,586	+		BWI76_RS06620	0.64	-0.9
1,392,586	+		BWI76_RS06620	0.64	-0.0
1,392,586	+		BWI76_RS06620	0.64	-0.3
1,392,594	-		BWI76_RS06620	0.65	-0.4
1,392,594	-		BWI76_RS06620	0.65	-1.7
1,392,594	-		BWI76_RS06620	0.65	-0.7
1,392,594	-		BWI76_RS06620	0.65	-0.4
1,392,594	-		BWI76_RS06620	0.65	-1.7
1,392,594	-		BWI76_RS06620	0.65	-0.3
1,392,611	+		BWI76_RS06620	0.67	-0.9
1,392,619	-		BWI76_RS06620	0.68	+0.2
1,392,621	+		BWI76_RS06620	0.68	-1.1
1,392,626	+		BWI76_RS06620	0.69	+0.2
1,392,626	+		BWI76_RS06620	0.69	-0.3
1,392,634	-		BWI76_RS06620	0.69	-1.9
1,392,671	+		BWI76_RS06620	0.73	-0.8
1,392,690	+		BWI76_RS06620	0.75	+0.6
1,392,698	+		BWI76_RS06620	0.76	+0.1
1,392,706	-		BWI76_RS06620	0.77	+1.3
1,392,737	+		BWI76_RS06620	0.80	-0.1
1,392,778	-		BWI76_RS06620	0.85	-4.2
1,392,785	+		BWI76_RS06620	0.85	-0.2
1,392,795	+		BWI76_RS06620	0.87	-0.2
1,392,898	+				+1.1
1,392,905	+				-1.5
1,392,983	-				-0.7
1,392,983	-				-1.7
1,393,013	-				-0.9
1,393,079	-		BWI76_RS06625	0.16	-2.0
1,393,191	-		BWI76_RS06625	0.29	-1.8
1,393,266	+		BWI76_RS06625	0.38	-0.9
1,393,492	-		BWI76_RS06625	0.63	-2.6
1,393,667	+		BWI76_RS06625	0.83	+0.0
1,393,675	-		BWI76_RS06625	0.84	-1.5
1,393,811	+				+1.0
1,393,871	-				+0.2
1,393,872	-				+0.1
1,393,934	+				+0.1
1,393,944	+				-0.4
1,393,992	+				-0.3
1,394,151	+		BWI76_RS06630	0.23	-0.7
1,394,325	+		BWI76_RS06630	0.57	+0.2
1,394,387	+		BWI76_RS06630	0.70	+1.1
1,394,439	-		BWI76_RS06630	0.80	-0.2
1,394,531	-				-1.3
1,394,627	+		BWI76_RS06635	0.15	-0.8
1,394,735	+		BWI76_RS06635	0.50	-0.8
1,394,744	-		BWI76_RS06635	0.53	-0.1