Experiment: KLEB1 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06045 and BWI76_RS06050 overlap by 1 nucleotides BWI76_RS06050 and BWI76_RS06055 are separated by 84 nucleotides
BWI76_RS06045: BWI76_RS06045 - hypothetical protein, at 1,270,058 to 1,271,089
_RS06045
BWI76_RS06050: BWI76_RS06050 - MFS transporter family glucose-6-phosphate receptor UhpC, at 1,271,089 to 1,272,390
_RS06050
BWI76_RS06055: BWI76_RS06055 - MASE1 sensor histidine kinase, at 1,272,475 to 1,274,016
_RS06055
Position (kb)
1271
1272
1273 Strain fitness (log2 ratio)
-1
0
1
2 at 1270.102 kb on - strand at 1270.158 kb on - strand at 1270.158 kb on - strand at 1270.560 kb on + strand, within BWI76_RS06045 at 1270.568 kb on - strand, within BWI76_RS06045 at 1270.625 kb on - strand, within BWI76_RS06045 at 1270.721 kb on - strand, within BWI76_RS06045 at 1270.736 kb on - strand, within BWI76_RS06045 at 1270.892 kb on - strand, within BWI76_RS06045 at 1271.579 kb on + strand, within BWI76_RS06050 at 1271.579 kb on - strand, within BWI76_RS06050 at 1271.608 kb on - strand, within BWI76_RS06050 at 1271.804 kb on + strand, within BWI76_RS06050 at 1271.951 kb on - strand at 1271.990 kb on - strand, within BWI76_RS06050 at 1272.008 kb on + strand, within BWI76_RS06050 at 1272.205 kb on - strand, within BWI76_RS06050 at 1272.238 kb on - strand, within BWI76_RS06050 at 1272.456 kb on + strand at 1272.544 kb on + strand at 1272.563 kb on + strand at 1272.642 kb on + strand, within BWI76_RS06055 at 1272.666 kb on + strand, within BWI76_RS06055 at 1272.721 kb on + strand, within BWI76_RS06055 at 1273.045 kb on + strand, within BWI76_RS06055
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB1 MOI 0.1 remove 1,270,102 - +1.0 1,270,158 - -0.1 1,270,158 - +0.5 1,270,560 + BWI76_RS06045 0.49 +0.2 1,270,568 - BWI76_RS06045 0.49 -0.0 1,270,625 - BWI76_RS06045 0.55 -0.5 1,270,721 - BWI76_RS06045 0.64 +0.0 1,270,736 - BWI76_RS06045 0.66 -0.3 1,270,892 - BWI76_RS06045 0.81 +0.8 1,271,579 + BWI76_RS06050 0.38 +0.3 1,271,579 - BWI76_RS06050 0.38 +0.7 1,271,608 - BWI76_RS06050 0.40 +1.1 1,271,804 + BWI76_RS06050 0.55 +0.5 1,271,951 - +1.4 1,271,990 - BWI76_RS06050 0.69 +2.0 1,272,008 + BWI76_RS06050 0.71 -0.3 1,272,205 - BWI76_RS06050 0.86 +1.2 1,272,238 - BWI76_RS06050 0.88 +2.2 1,272,456 + -0.2 1,272,544 + +0.4 1,272,563 + +0.4 1,272,642 + BWI76_RS06055 0.11 -1.1 1,272,666 + BWI76_RS06055 0.12 -0.5 1,272,721 + BWI76_RS06055 0.16 -0.6 1,273,045 + BWI76_RS06055 0.37 +0.2
Or see this region's nucleotide sequence