Experiment: KLEB1 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13030 and BWI76_RS13035 are separated by 228 nucleotides BWI76_RS13035 and BWI76_RS13040 are separated by 102 nucleotides
BWI76_RS13030: BWI76_RS13030 - site-specific recombinase, phage integrase family protein, at 2,718,794 to 2,719,396
_RS13030
BWI76_RS13035: BWI76_RS13035 - MFS transporter, at 2,719,625 to 2,721,079
_RS13035
BWI76_RS13040: BWI76_RS13040 - transcriptional regulator, at 2,721,182 to 2,721,985
_RS13040
Position (kb)
2719
2720
2721
2722 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2718.633 kb on + strand at 2718.776 kb on + strand at 2719.149 kb on + strand, within BWI76_RS13030 at 2719.174 kb on + strand, within BWI76_RS13030 at 2719.460 kb on + strand at 2719.604 kb on - strand at 2719.681 kb on - strand at 2719.692 kb on + strand at 2719.737 kb on + strand at 2719.737 kb on + strand at 2719.745 kb on - strand at 2719.745 kb on - strand at 2719.745 kb on - strand at 2719.747 kb on + strand at 2719.799 kb on + strand, within BWI76_RS13035 at 2719.807 kb on - strand, within BWI76_RS13035 at 2719.835 kb on - strand, within BWI76_RS13035 at 2720.016 kb on - strand, within BWI76_RS13035 at 2720.018 kb on + strand, within BWI76_RS13035 at 2720.026 kb on - strand, within BWI76_RS13035 at 2720.043 kb on + strand, within BWI76_RS13035 at 2720.046 kb on - strand, within BWI76_RS13035 at 2720.089 kb on + strand, within BWI76_RS13035 at 2720.108 kb on - strand, within BWI76_RS13035 at 2720.145 kb on - strand, within BWI76_RS13035 at 2720.148 kb on + strand, within BWI76_RS13035 at 2720.199 kb on + strand, within BWI76_RS13035 at 2720.226 kb on - strand, within BWI76_RS13035 at 2720.226 kb on - strand, within BWI76_RS13035 at 2720.354 kb on + strand, within BWI76_RS13035 at 2720.354 kb on + strand, within BWI76_RS13035 at 2720.369 kb on + strand, within BWI76_RS13035 at 2720.377 kb on - strand at 2720.377 kb on - strand, within BWI76_RS13035 at 2720.403 kb on + strand, within BWI76_RS13035 at 2720.444 kb on + strand, within BWI76_RS13035 at 2720.452 kb on - strand, within BWI76_RS13035 at 2720.611 kb on + strand, within BWI76_RS13035 at 2720.611 kb on + strand, within BWI76_RS13035 at 2720.619 kb on - strand, within BWI76_RS13035 at 2720.619 kb on - strand, within BWI76_RS13035 at 2720.699 kb on + strand, within BWI76_RS13035 at 2720.783 kb on - strand, within BWI76_RS13035 at 2720.793 kb on - strand, within BWI76_RS13035 at 2720.934 kb on - strand at 2720.934 kb on - strand at 2721.055 kb on + strand at 2721.094 kb on + strand at 2721.645 kb on - strand, within BWI76_RS13040 at 2721.696 kb on + strand, within BWI76_RS13040 at 2721.718 kb on - strand, within BWI76_RS13040 at 2721.776 kb on - strand, within BWI76_RS13040 at 2722.076 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB1 MOI 0.1 remove 2,718,633 + -1.0 2,718,776 + +0.0 2,719,149 + BWI76_RS13030 0.59 -2.1 2,719,174 + BWI76_RS13030 0.63 -0.5 2,719,460 + +1.2 2,719,604 - +0.0 2,719,681 - -3.2 2,719,692 + +0.4 2,719,737 + +0.0 2,719,737 + +2.6 2,719,745 - -0.3 2,719,745 - -2.0 2,719,745 - +1.4 2,719,747 + -0.7 2,719,799 + BWI76_RS13035 0.12 +0.4 2,719,807 - BWI76_RS13035 0.13 -1.0 2,719,835 - BWI76_RS13035 0.14 -2.1 2,720,016 - BWI76_RS13035 0.27 -0.7 2,720,018 + BWI76_RS13035 0.27 -3.6 2,720,026 - BWI76_RS13035 0.28 +0.4 2,720,043 + BWI76_RS13035 0.29 -1.9 2,720,046 - BWI76_RS13035 0.29 -0.7 2,720,089 + BWI76_RS13035 0.32 -2.1 2,720,108 - BWI76_RS13035 0.33 +0.4 2,720,145 - BWI76_RS13035 0.36 -2.4 2,720,148 + BWI76_RS13035 0.36 -1.0 2,720,199 + BWI76_RS13035 0.39 -0.6 2,720,226 - BWI76_RS13035 0.41 -2.4 2,720,226 - BWI76_RS13035 0.41 -1.3 2,720,354 + BWI76_RS13035 0.50 -0.0 2,720,354 + BWI76_RS13035 0.50 -1.5 2,720,369 + BWI76_RS13035 0.51 -0.7 2,720,377 - +0.0 2,720,377 - BWI76_RS13035 0.52 -1.3 2,720,403 + BWI76_RS13035 0.53 -1.1 2,720,444 + BWI76_RS13035 0.56 -0.1 2,720,452 - BWI76_RS13035 0.57 -2.1 2,720,611 + BWI76_RS13035 0.68 -0.9 2,720,611 + BWI76_RS13035 0.68 -1.0 2,720,619 - BWI76_RS13035 0.68 -1.1 2,720,619 - BWI76_RS13035 0.68 +0.5 2,720,699 + BWI76_RS13035 0.74 -0.7 2,720,783 - BWI76_RS13035 0.80 -0.4 2,720,793 - BWI76_RS13035 0.80 -0.6 2,720,934 - -1.3 2,720,934 - +0.1 2,721,055 + -0.7 2,721,094 + -1.1 2,721,645 - BWI76_RS13040 0.58 -0.9 2,721,696 + BWI76_RS13040 0.64 +0.9 2,721,718 - BWI76_RS13040 0.67 -1.6 2,721,776 - BWI76_RS13040 0.74 -1.5 2,722,076 - +0.6
Or see this region's nucleotide sequence