Experiment: KLEB1 MOI 10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27685 and BWI76_RS27690 are separated by 453 nucleotides BWI76_RS27690 and BWI76_RS27695 overlap by 1 nucleotides
BWI76_RS27685: BWI76_RS27685 - N-acetyltransferase, at 5,743,359 to 5,743,775
_RS27685
BWI76_RS27690: BWI76_RS27690 - MexE family multidrug efflux RND transporter periplasmic adaptor subunit, at 5,744,229 to 5,745,353
_RS27690
BWI76_RS27695: BWI76_RS27695 - multidrug efflux RND transporter permease subunit, at 5,745,353 to 5,748,460
_RS27695
Position (kb) 5744
5745
5746 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 5743.229 kb on + strand at 5743.240 kb on + strand at 5743.247 kb on + strand at 5743.354 kb on - strand at 5743.354 kb on - strand at 5743.396 kb on - strand at 5743.492 kb on - strand, within BWI76_RS27685 at 5743.492 kb on - strand, within BWI76_RS27685 at 5743.597 kb on + strand, within BWI76_RS27685 at 5743.635 kb on + strand, within BWI76_RS27685 at 5743.669 kb on - strand, within BWI76_RS27685 at 5743.674 kb on + strand, within BWI76_RS27685 at 5743.674 kb on + strand, within BWI76_RS27685 at 5743.674 kb on + strand, within BWI76_RS27685 at 5743.674 kb on + strand, within BWI76_RS27685 at 5743.682 kb on - strand, within BWI76_RS27685 at 5743.684 kb on + strand, within BWI76_RS27685 at 5743.684 kb on + strand, within BWI76_RS27685 at 5743.685 kb on + strand, within BWI76_RS27685 at 5743.685 kb on + strand, within BWI76_RS27685 at 5743.685 kb on + strand, within BWI76_RS27685 at 5743.685 kb on + strand, within BWI76_RS27685 at 5743.685 kb on + strand, within BWI76_RS27685 at 5743.693 kb on - strand, within BWI76_RS27685 at 5743.693 kb on - strand, within BWI76_RS27685 at 5743.695 kb on + strand, within BWI76_RS27685 at 5743.713 kb on - strand, within BWI76_RS27685 at 5743.717 kb on + strand, within BWI76_RS27685 at 5743.717 kb on + strand, within BWI76_RS27685 at 5743.717 kb on + strand, within BWI76_RS27685 at 5743.717 kb on + strand, within BWI76_RS27685 at 5743.723 kb on - strand, within BWI76_RS27685 at 5743.725 kb on - strand, within BWI76_RS27685 at 5743.725 kb on - strand, within BWI76_RS27685 at 5743.725 kb on - strand, within BWI76_RS27685 at 5743.725 kb on - strand, within BWI76_RS27685 at 5743.730 kb on + strand, within BWI76_RS27685 at 5743.735 kb on - strand at 5743.759 kb on + strand at 5743.814 kb on - strand at 5743.814 kb on - strand at 5743.908 kb on + strand at 5743.916 kb on - strand at 5743.916 kb on - strand at 5743.916 kb on - strand at 5744.052 kb on + strand at 5744.097 kb on + strand at 5744.105 kb on - strand at 5744.120 kb on - strand at 5744.134 kb on + strand at 5744.153 kb on + strand at 5744.153 kb on + strand at 5744.153 kb on + strand at 5744.154 kb on + strand at 5744.161 kb on - strand at 5744.161 kb on - strand at 5744.171 kb on + strand at 5744.171 kb on + strand at 5744.171 kb on + strand at 5744.171 kb on + strand at 5744.171 kb on + strand at 5744.171 kb on + strand at 5744.171 kb on + strand at 5744.173 kb on + strand at 5744.179 kb on - strand at 5744.179 kb on - strand at 5744.179 kb on - strand at 5744.179 kb on - strand at 5744.179 kb on - strand at 5744.179 kb on - strand at 5744.179 kb on - strand at 5744.185 kb on - strand at 5744.203 kb on + strand at 5744.215 kb on - strand at 5744.216 kb on - strand at 5744.249 kb on + strand at 5744.257 kb on - strand at 5744.257 kb on - strand at 5744.268 kb on - strand at 5744.271 kb on - strand at 5744.296 kb on + strand at 5744.297 kb on + strand at 5744.304 kb on - strand at 5744.309 kb on + strand at 5744.331 kb on + strand at 5744.332 kb on + strand at 5744.340 kb on - strand at 5744.345 kb on + strand, within BWI76_RS27690 at 5744.345 kb on + strand, within BWI76_RS27690 at 5744.353 kb on - strand, within BWI76_RS27690 at 5744.353 kb on - strand, within BWI76_RS27690 at 5744.355 kb on + strand, within BWI76_RS27690 at 5744.364 kb on - strand, within BWI76_RS27690 at 5744.369 kb on - strand, within BWI76_RS27690 at 5744.384 kb on + strand, within BWI76_RS27690 at 5744.391 kb on + strand, within BWI76_RS27690 at 5744.404 kb on - strand, within BWI76_RS27690 at 5744.409 kb on - strand, within BWI76_RS27690 at 5744.420 kb on + strand, within BWI76_RS27690 at 5744.421 kb on - strand, within BWI76_RS27690 at 5744.490 kb on - strand, within BWI76_RS27690 at 5744.525 kb on - strand, within BWI76_RS27690 at 5744.564 kb on - strand, within BWI76_RS27690 at 5744.569 kb on - strand, within BWI76_RS27690 at 5744.689 kb on - strand, within BWI76_RS27690 at 5744.724 kb on - strand, within BWI76_RS27690 at 5744.824 kb on - strand, within BWI76_RS27690 at 5744.925 kb on - strand, within BWI76_RS27690 at 5744.935 kb on + strand, within BWI76_RS27690 at 5745.200 kb on - strand, within BWI76_RS27690 at 5745.249 kb on + strand at 5745.319 kb on - strand at 5745.363 kb on - strand at 5745.387 kb on + strand at 5745.593 kb on + strand at 5745.629 kb on - strand at 5745.717 kb on - strand, within BWI76_RS27695 at 5745.719 kb on + strand, within BWI76_RS27695 at 5745.725 kb on - strand, within BWI76_RS27695 at 5745.727 kb on - strand, within BWI76_RS27695 at 5745.727 kb on - strand, within BWI76_RS27695 at 5745.923 kb on - strand, within BWI76_RS27695 at 5745.939 kb on + strand at 5745.995 kb on - strand, within BWI76_RS27695 at 5746.045 kb on - strand, within BWI76_RS27695 at 5746.119 kb on - strand, within BWI76_RS27695 at 5746.258 kb on - strand, within BWI76_RS27695 at 5746.258 kb on - strand, within BWI76_RS27695
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB1 MOI 10 remove 5,743,229 + -2.0 5,743,240 + +0.2 5,743,247 + -0.3 5,743,354 - +1.0 5,743,354 - +0.4 5,743,396 - -1.2 5,743,492 - BWI76_RS27685 0.32 -2.6 5,743,492 - BWI76_RS27685 0.32 +1.0 5,743,597 + BWI76_RS27685 0.57 +0.7 5,743,635 + BWI76_RS27685 0.66 +0.6 5,743,669 - BWI76_RS27685 0.74 +0.2 5,743,674 + BWI76_RS27685 0.76 +0.9 5,743,674 + BWI76_RS27685 0.76 +1.6 5,743,674 + BWI76_RS27685 0.76 +0.8 5,743,674 + BWI76_RS27685 0.76 -0.7 5,743,682 - BWI76_RS27685 0.77 +0.0 5,743,684 + BWI76_RS27685 0.78 +0.9 5,743,684 + BWI76_RS27685 0.78 -0.1 5,743,685 + BWI76_RS27685 0.78 -0.7 5,743,685 + BWI76_RS27685 0.78 -1.9 5,743,685 + BWI76_RS27685 0.78 +0.9 5,743,685 + BWI76_RS27685 0.78 +0.2 5,743,685 + BWI76_RS27685 0.78 -0.1 5,743,693 - BWI76_RS27685 0.80 +0.3 5,743,693 - BWI76_RS27685 0.80 +1.2 5,743,695 + BWI76_RS27685 0.81 -2.6 5,743,713 - BWI76_RS27685 0.85 +0.5 5,743,717 + BWI76_RS27685 0.86 -3.5 5,743,717 + BWI76_RS27685 0.86 +1.2 5,743,717 + BWI76_RS27685 0.86 +0.7 5,743,717 + BWI76_RS27685 0.86 -0.4 5,743,723 - BWI76_RS27685 0.87 +0.5 5,743,725 - BWI76_RS27685 0.88 -0.8 5,743,725 - BWI76_RS27685 0.88 +1.2 5,743,725 - BWI76_RS27685 0.88 -0.1 5,743,725 - BWI76_RS27685 0.88 +0.1 5,743,730 + BWI76_RS27685 0.89 +0.4 5,743,735 - +0.1 5,743,759 + +0.4 5,743,814 - +0.7 5,743,814 - +1.1 5,743,908 + -0.4 5,743,916 - +0.3 5,743,916 - -1.5 5,743,916 - +0.7 5,744,052 + -3.2 5,744,097 + -0.1 5,744,105 - +0.6 5,744,120 - -0.1 5,744,134 + -0.8 5,744,153 + +0.3 5,744,153 + -1.1 5,744,153 + -0.8 5,744,154 + -3.0 5,744,161 - -0.8 5,744,161 - -1.9 5,744,171 + -0.3 5,744,171 + +2.3 5,744,171 + -0.1 5,744,171 + +1.3 5,744,171 + -0.4 5,744,171 + +0.5 5,744,171 + -3.1 5,744,173 + -2.5 5,744,179 - +0.3 5,744,179 - -0.2 5,744,179 - +2.6 5,744,179 - -4.0 5,744,179 - +0.8 5,744,179 - -0.6 5,744,179 - -0.1 5,744,185 - -0.1 5,744,203 + +1.2 5,744,215 - +0.9 5,744,216 - +0.8 5,744,249 + -0.3 5,744,257 - -0.0 5,744,257 - -0.2 5,744,268 - -1.6 5,744,271 - -0.2 5,744,296 + -1.9 5,744,297 + -0.3 5,744,304 - +0.8 5,744,309 + -0.5 5,744,331 + +1.3 5,744,332 + -0.8 5,744,340 - -3.4 5,744,345 + BWI76_RS27690 0.10 +1.3 5,744,345 + BWI76_RS27690 0.10 -0.2 5,744,353 - BWI76_RS27690 0.11 +0.4 5,744,353 - BWI76_RS27690 0.11 +0.2 5,744,355 + BWI76_RS27690 0.11 +0.4 5,744,364 - BWI76_RS27690 0.12 +0.4 5,744,369 - BWI76_RS27690 0.12 +0.6 5,744,384 + BWI76_RS27690 0.14 +0.6 5,744,391 + BWI76_RS27690 0.14 -3.7 5,744,404 - BWI76_RS27690 0.16 +0.6 5,744,409 - BWI76_RS27690 0.16 -0.6 5,744,420 + BWI76_RS27690 0.17 -0.3 5,744,421 - BWI76_RS27690 0.17 +1.3 5,744,490 - BWI76_RS27690 0.23 +0.5 5,744,525 - BWI76_RS27690 0.26 +1.3 5,744,564 - BWI76_RS27690 0.30 +0.2 5,744,569 - BWI76_RS27690 0.30 +0.4 5,744,689 - BWI76_RS27690 0.41 +2.4 5,744,724 - BWI76_RS27690 0.44 +0.2 5,744,824 - BWI76_RS27690 0.53 +1.4 5,744,925 - BWI76_RS27690 0.62 -0.5 5,744,935 + BWI76_RS27690 0.63 -0.6 5,745,200 - BWI76_RS27690 0.86 -0.3 5,745,249 + -2.7 5,745,319 - -0.3 5,745,363 - +0.4 5,745,387 + -0.2 5,745,593 + -0.1 5,745,629 - -0.2 5,745,717 - BWI76_RS27695 0.12 +0.7 5,745,719 + BWI76_RS27695 0.12 +2.1 5,745,725 - BWI76_RS27695 0.12 +0.0 5,745,727 - BWI76_RS27695 0.12 -1.9 5,745,727 - BWI76_RS27695 0.12 -1.7 5,745,923 - BWI76_RS27695 0.18 +0.8 5,745,939 + -1.4 5,745,995 - BWI76_RS27695 0.21 -1.1 5,746,045 - BWI76_RS27695 0.22 -0.4 5,746,119 - BWI76_RS27695 0.25 -0.1 5,746,258 - BWI76_RS27695 0.29 -0.6 5,746,258 - BWI76_RS27695 0.29 +1.4
Or see this region's nucleotide sequence