Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15465

Experiment: KLEB1 MOI 10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB1 MOI 10
3,238,303	-		BWI76_RS15455	0.85	-0.3
3,238,303	-		BWI76_RS15455	0.85	+0.9
3,238,314	+		BWI76_RS15455	0.87	+1.5
3,238,327	+		BWI76_RS15455	0.90	-1.1
3,238,383	-				-1.4
3,238,385	+				+0.2
3,238,393	-				-1.0
3,238,395	+				+1.1
3,238,398	-				-1.0
3,238,403	-				-2.1
3,238,421	-				-0.2
3,238,421	-				-1.0
3,238,428	+				+0.0
3,238,436	+				+0.3
3,238,444	-				+0.1
3,238,444	-				-0.6
3,238,481	-				+1.8
3,238,501	-				+0.1
3,238,507	+				+0.9
3,238,534	-				-2.1
3,238,596	+		BWI76_RS15460	0.21	-0.1
3,238,596	+		BWI76_RS15460	0.21	-2.1
3,238,596	+		BWI76_RS15460	0.21	+0.4
3,238,596	+		BWI76_RS15460	0.21	-1.4
3,238,596	+		BWI76_RS15460	0.21	+1.7
3,238,596	+		BWI76_RS15460	0.21	-0.4
3,238,604	-		BWI76_RS15460	0.23	-1.1
3,238,604	-		BWI76_RS15460	0.23	-2.2
3,238,606	+		BWI76_RS15460	0.23	+0.2
3,238,699	+		BWI76_RS15460	0.43	-1.1
3,238,720	+		BWI76_RS15460	0.47	+0.3
3,238,720	+		BWI76_RS15460	0.47	+0.2
3,238,720	+		BWI76_RS15460	0.47	-1.4
3,238,720	+		BWI76_RS15460	0.47	+1.4
3,238,725	+		BWI76_RS15460	0.48	+1.7
3,238,728	-		BWI76_RS15460	0.49	+1.0
3,238,748	+		BWI76_RS15460	0.53	-0.0
3,238,758	+		BWI76_RS15460	0.55	+1.4
3,238,758	+		BWI76_RS15460	0.55	-0.6
3,238,758	+		BWI76_RS15460	0.55	-0.9
3,238,787	+		BWI76_RS15460	0.61	-1.7
3,238,874	+		BWI76_RS15460	0.79	-0.7
3,238,882	-		BWI76_RS15460	0.81	-1.7
3,238,885	+		BWI76_RS15460	0.82	-2.2
3,238,896	+		BWI76_RS15460	0.84	-2.1
3,238,896	+		BWI76_RS15460	0.84	+0.7
3,238,896	+		BWI76_RS15460	0.84	+0.4
3,238,896	+		BWI76_RS15460	0.84	-0.0
3,238,960	+				-2.2
3,238,960	+				-3.1
3,239,016	-				-1.4
3,239,049	+				+1.0
3,239,068	-				+0.9
3,239,068	-				-3.6
3,239,074	-				-2.5
3,239,074	-				-2.2
3,239,081	-				-2.7
3,239,123	-				-2.1
3,239,123	-				+0.0
3,239,162	-				-0.3
3,239,302	-				+1.8
3,239,329	-				-0.5
3,239,337	+				+2.6
3,239,345	-				-1.1
3,239,345	-				+0.3
3,239,351	-				+0.9
3,239,366	-				+0.4
3,239,366	-		BWI76_RS15465	0.11	+1.7
3,239,367	-		BWI76_RS15465	0.11	+0.0
3,239,385	-		BWI76_RS15465	0.14	-0.3
3,239,425	-		BWI76_RS15465	0.21	+0.4
3,239,483	+		BWI76_RS15465	0.30	+2.0
3,239,483	+		BWI76_RS15465	0.30	+1.0
3,239,483	+				+0.4
3,239,483	+		BWI76_RS15465	0.30	+0.5
3,239,483	+		BWI76_RS15465	0.30	+2.3
3,239,483	+		BWI76_RS15465	0.30	-1.7
3,239,483	+		BWI76_RS15465	0.30	-0.6
3,239,483	+		BWI76_RS15465	0.30	+2.4
3,239,483	+		BWI76_RS15465	0.30	-2.0
3,239,483	+		BWI76_RS15465	0.30	+2.3
3,239,483	+		BWI76_RS15465	0.30	-2.7
3,239,483	+		BWI76_RS15465	0.30	+0.0
3,239,483	+		BWI76_RS15465	0.30	+0.4
3,239,483	+		BWI76_RS15465	0.30	+0.3
3,239,483	+				+1.0
3,239,483	+		BWI76_RS15465	0.30	+2.0
3,239,483	+		BWI76_RS15465	0.30	+0.4
3,239,483	+		BWI76_RS15465	0.30	+1.9
3,239,483	+		BWI76_RS15465	0.30	+0.4
3,239,491	-		BWI76_RS15465	0.32	+0.0
3,239,491	-		BWI76_RS15465	0.32	+1.0
3,239,491	-		BWI76_RS15465	0.32	+0.6
3,239,491	-		BWI76_RS15465	0.32	+2.0
3,239,491	-		BWI76_RS15465	0.32	+0.9
3,239,491	-		BWI76_RS15465	0.32	-0.7
3,239,491	-				+0.0
3,239,491	-		BWI76_RS15465	0.32	-2.1
3,239,491	-		BWI76_RS15465	0.32	-1.7
3,239,491	-		BWI76_RS15465	0.32	-0.3
3,239,491	-		BWI76_RS15465	0.32	-1.0
3,239,491	-		BWI76_RS15465	0.32	+0.4
3,239,491	-		BWI76_RS15465	0.32	+0.0
3,239,491	-		BWI76_RS15465	0.32	-1.3
3,239,491	-		BWI76_RS15465	0.32	-0.8
3,239,491	-		BWI76_RS15465	0.32	-0.8
3,239,491	-		BWI76_RS15465	0.32	-1.0
3,239,506	-		BWI76_RS15465	0.34	+0.9
3,239,574	+		BWI76_RS15465	0.45	-0.6
3,239,574	+		BWI76_RS15465	0.45	+0.0
3,239,582	-		BWI76_RS15465	0.46	+0.0
3,239,582	-				+0.0
3,239,582	-		BWI76_RS15465	0.46	-1.3
3,239,587	+		BWI76_RS15465	0.47	+1.0
3,239,587	-		BWI76_RS15465	0.47	-1.1
3,239,587	-		BWI76_RS15465	0.47	-1.9
3,239,587	-		BWI76_RS15465	0.47	+0.4
3,239,593	+		BWI76_RS15465	0.48	+2.0
3,239,595	-		BWI76_RS15465	0.49	-0.6
3,239,595	-				+0.4
3,239,601	-		BWI76_RS15465	0.50	+1.3
3,239,601	-		BWI76_RS15465	0.50	+0.4
3,239,601	-		BWI76_RS15465	0.50	-1.3
3,239,601	-		BWI76_RS15465	0.50	-2.7
3,239,657	+		BWI76_RS15465	0.59	+0.9
3,239,678	-				-0.6
3,239,685	+		BWI76_RS15465	0.63	-1.3
3,239,697	+		BWI76_RS15465	0.65	+2.0
3,239,705	-		BWI76_RS15465	0.67	-1.0
3,239,721	+		BWI76_RS15465	0.69	-2.2
3,239,726	+		BWI76_RS15465	0.70	-1.8
3,239,729	-		BWI76_RS15465	0.70	+0.4
3,239,739	-				-0.3
3,239,755	+		BWI76_RS15465	0.75	-1.9
3,239,755	+		BWI76_RS15465	0.75	-3.2
3,239,755	+		BWI76_RS15465	0.75	+0.4
3,239,755	+		BWI76_RS15465	0.75	+0.5
3,239,755	+		BWI76_RS15465	0.75	+1.9
3,239,755	+		BWI76_RS15465	0.75	-0.3
3,239,755	+		BWI76_RS15465	0.75	+2.6
3,239,763	-		BWI76_RS15465	0.76	-0.3
3,239,763	-		BWI76_RS15465	0.76	+0.6
3,239,763	-		BWI76_RS15465	0.76	+0.0
3,239,763	-				-0.6
3,239,806	+		BWI76_RS15465	0.83	-3.6
3,239,806	+		BWI76_RS15465	0.83	+1.0
3,239,811	+		BWI76_RS15465	0.84	+0.5
3,239,833	+		BWI76_RS15465	0.87	-3.4
3,239,833	+		BWI76_RS15465	0.87	-2.7
3,239,841	-		BWI76_RS15465	0.89	-1.3
3,239,887	+				-0.5
3,239,920	+				-0.6
3,239,920	+				+0.6
3,239,928	-				+2.0
3,239,928	-				-1.4
3,239,933	+				-0.8
3,239,964	+				+2.0
3,239,989	+				-3.1
3,240,019	+				+1.5
3,240,020	-				-1.7
3,240,051	-				-1.3
3,240,069	+				-1.3
3,240,110	+				+0.8
3,240,119	-				+0.0
3,240,142	+				+0.2
3,240,225	+				+1.7
3,240,303	+				-0.7