Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11540

Experiment: KLEB1 MOI 10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB1 MOI 10
2,427,190	-		BWI76_RS11535	0.52	-0.5
2,427,342	+		BWI76_RS11535	0.66	+0.8
2,427,510	+		BWI76_RS11535	0.82	+0.8
2,427,579	-		BWI76_RS11535	0.88	+1.5
2,427,617	+				-1.2
2,427,951	-		BWI76_RS11540	0.16	+0.3
2,428,061	+		BWI76_RS11540	0.24	-2.6
2,428,177	+		BWI76_RS11540	0.32	-1.1
2,428,207	+		BWI76_RS11540	0.34	-3.0
2,428,228	-		BWI76_RS11540	0.36	-1.7
2,428,240	+		BWI76_RS11540	0.37	-0.0
2,428,240	+		BWI76_RS11540	0.37	+0.8
2,428,240	+		BWI76_RS11540	0.37	+0.8
2,428,248	-		BWI76_RS11540	0.37	-0.4
2,428,248	-		BWI76_RS11540	0.37	-0.3
2,428,276	+		BWI76_RS11540	0.39	-1.8
2,428,276	-		BWI76_RS11540	0.39	-1.9
2,428,308	+				+0.3
2,428,374	-		BWI76_RS11540	0.46	+2.4
2,428,407	+		BWI76_RS11540	0.49	+1.0
2,428,413	-		BWI76_RS11540	0.49	-1.9
2,428,471	+		BWI76_RS11540	0.53	+1.1
2,428,490	+		BWI76_RS11540	0.55	-1.0
2,428,490	+		BWI76_RS11540	0.55	-1.2
2,428,503	-		BWI76_RS11540	0.56	-1.3
2,428,505	+		BWI76_RS11540	0.56	-1.7
2,428,513	+		BWI76_RS11540	0.56	-2.7
2,428,513	+		BWI76_RS11540	0.56	+0.2
2,428,513	-		BWI76_RS11540	0.56	+3.0
2,428,521	-		BWI76_RS11540	0.57	+3.8
2,428,543	+		BWI76_RS11540	0.59	-1.3
2,428,551	-		BWI76_RS11540	0.59	-1.0
2,428,551	-				+1.8
2,428,551	-		BWI76_RS11540	0.59	-1.2
2,428,557	+		BWI76_RS11540	0.60	-2.2
2,428,557	+		BWI76_RS11540	0.60	+0.5
2,428,569	+		BWI76_RS11540	0.60	-0.2
2,428,569	+		BWI76_RS11540	0.60	+1.4
2,428,569	+		BWI76_RS11540	0.60	-0.3
2,428,572	+		BWI76_RS11540	0.61	-0.7
2,428,577	-		BWI76_RS11540	0.61	+2.3
2,428,729	+		BWI76_RS11540	0.72	-2.1
2,428,729	+		BWI76_RS11540	0.72	+1.5
2,428,729	+		BWI76_RS11540	0.72	-1.5
2,428,737	-		BWI76_RS11540	0.73	-1.3
2,428,737	-		BWI76_RS11540	0.73	+1.8
2,428,737	-		BWI76_RS11540	0.73	+0.8
2,428,750	+		BWI76_RS11540	0.74	-0.2
2,428,751	-				+1.8
2,428,760	+		BWI76_RS11540	0.74	-2.9
2,428,761	+		BWI76_RS11540	0.74	-0.1
2,428,801	+				-1.2
2,428,805	+		BWI76_RS11540	0.78	+1.8
2,428,845	+		BWI76_RS11540	0.80	+0.9
2,428,845	+				-0.2
2,428,845	+		BWI76_RS11540	0.80	-3.4
2,428,852	+		BWI76_RS11540	0.81	-0.2
2,428,853	-		BWI76_RS11540	0.81	-1.9
2,428,860	-		BWI76_RS11540	0.82	+0.8
2,428,878	+		BWI76_RS11540	0.83	-1.0
2,428,888	+		BWI76_RS11540	0.84	+0.3
2,428,888	+		BWI76_RS11540	0.84	-0.2
2,428,903	+		BWI76_RS11540	0.85	-1.3
2,428,903	+		BWI76_RS11540	0.85	-4.5
2,428,903	+		BWI76_RS11540	0.85	+0.1
2,428,903	+		BWI76_RS11540	0.85	-3.7
2,428,903	+		BWI76_RS11540	0.85	-2.2
2,428,903	+		BWI76_RS11540	0.85	-0.8
2,428,903	+		BWI76_RS11540	0.85	-2.3
2,428,903	+		BWI76_RS11540	0.85	-1.2
2,428,903	+		BWI76_RS11540	0.85	+1.0
2,428,908	+		BWI76_RS11540	0.85	-1.6
2,428,908	+		BWI76_RS11540	0.85	-3.4
2,428,908	+		BWI76_RS11540	0.85	-0.2
2,428,908	+		BWI76_RS11540	0.85	+0.2
2,428,908	+		BWI76_RS11540	0.85	-2.0
2,428,908	+		BWI76_RS11540	0.85	+0.1
2,428,908	+		BWI76_RS11540	0.85	-2.8
2,428,908	+		BWI76_RS11540	0.85	-0.8
2,428,911	-		BWI76_RS11540	0.85	+1.8
2,428,911	-		BWI76_RS11540	0.85	+1.8
2,428,911	-		BWI76_RS11540	0.85	+1.3
2,428,913	+		BWI76_RS11540	0.85	-1.4
2,428,916	-		BWI76_RS11540	0.86	-0.5
2,428,931	+		BWI76_RS11540	0.87	-1.2
2,428,970	+		BWI76_RS11540	0.89	+0.8
2,428,970	+		BWI76_RS11540	0.89	-0.7
2,428,970	+		BWI76_RS11540	0.89	+0.9
2,428,970	+		BWI76_RS11540	0.89	+0.8
2,428,970	+		BWI76_RS11540	0.89	-0.9
2,428,970	+		BWI76_RS11540	0.89	-0.9
2,428,976	+		BWI76_RS11540	0.90	+0.7
2,428,976	+		BWI76_RS11540	0.90	-1.6
2,428,978	+				+0.1
2,428,978	+				+0.5
2,428,978	-				-2.9
2,428,983	+				+0.9
2,428,992	+				-2.5
2,429,006	+				+1.1
2,429,006	+				-0.7
2,429,006	+				-2.5
2,429,006	+				+0.3
2,429,006	+				-0.6
2,429,006	+				+1.5
2,429,006	+				-2.0
2,429,006	+				-1.0
2,429,006	+				-1.7
2,429,006	+				-0.1
2,429,006	+				-2.2
2,429,006	+				-0.2
2,429,006	+				+0.3
2,429,006	+				+0.6
2,429,014	-				+0.3
2,429,014	-				-0.3
2,429,020	+				-0.3
2,429,020	+				-1.5
2,429,074	+				+0.2
2,429,076	+				+1.7
2,429,076	+				-0.8
2,429,084	+				-0.3
2,429,084	+				-2.1
2,429,084	+				+1.0
2,429,084	+				-1.3
2,429,207	+				+0.2
2,429,208	+				-1.4
2,429,208	+				-2.9
2,429,208	+				-1.1
2,429,208	+				-2.2
2,429,208	+				-1.5
2,429,226	+				-0.1
2,429,250	+		BWI76_RS11545	0.11	+0.3
2,429,258	-		BWI76_RS11545	0.12	+0.8
2,429,265	+		BWI76_RS11545	0.13	-0.2
2,429,265	+		BWI76_RS11545	0.13	+0.4
2,429,265	+		BWI76_RS11545	0.13	+1.5
2,429,280	+		BWI76_RS11545	0.14	+0.7
2,429,315	+		BWI76_RS11545	0.18	+0.4
2,429,334	+		BWI76_RS11545	0.19	-0.7
2,429,337	+		BWI76_RS11545	0.20	+0.5
2,429,348	+		BWI76_RS11545	0.21	+0.8
2,429,351	+		BWI76_RS11545	0.21	-0.5
2,429,351	+		BWI76_RS11545	0.21	-1.2
2,429,351	-		BWI76_RS11545	0.21	-0.2
2,429,370	+		BWI76_RS11545	0.23	+1.1
2,429,386	-		BWI76_RS11545	0.24	-0.7
2,429,397	-		BWI76_RS11545	0.25	-1.2
2,429,405	+		BWI76_RS11545	0.26	+2.3
2,429,441	-		BWI76_RS11545	0.30	-0.2
2,429,520	-		BWI76_RS11545	0.37	+0.8
2,429,525	+		BWI76_RS11545	0.38	-2.6
2,429,530	-		BWI76_RS11545	0.38	+2.7
2,429,538	+		BWI76_RS11545	0.39	-2.4
2,429,538	+		BWI76_RS11545	0.39	+2.0
2,429,546	-		BWI76_RS11545	0.40	-2.5
2,429,546	-		BWI76_RS11545	0.40	-4.3
2,429,581	+		BWI76_RS11545	0.43	-1.5
2,429,581	+		BWI76_RS11545	0.43	+1.3
2,429,581	+		BWI76_RS11545	0.43	-0.5
2,429,625	+		BWI76_RS11545	0.47	-0.9
2,429,715	+		BWI76_RS11545	0.56	-0.7
2,429,880	+		BWI76_RS11545	0.72	-0.2
2,429,888	-		BWI76_RS11545	0.72	-1.0
2,429,888	-				+0.3
2,429,910	-		BWI76_RS11545	0.75	+0.8
2,429,939	+		BWI76_RS11545	0.77	+0.6
2,429,947	-		BWI76_RS11545	0.78	+0.8
2,429,984	+		BWI76_RS11545	0.82	+0.3
2,429,990	+		BWI76_RS11545	0.82	+0.5
2,430,009	+		BWI76_RS11545	0.84	-2.6
2,430,011	+		BWI76_RS11545	0.84	-0.4
2,430,016	+		BWI76_RS11545	0.85	+1.7
2,430,016	+		BWI76_RS11545	0.85	+0.1
2,430,016	+		BWI76_RS11545	0.85	-1.4
2,430,024	-		BWI76_RS11545	0.85	-0.2
2,430,101	+				-2.7