Experiment: KLEB1 MOI 10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24610 and BWI76_RS24615 are separated by 280 nucleotides BWI76_RS24615 and BWI76_RS24620 are separated by 236 nucleotides BWI76_RS24620 and BWI76_RS24625 are separated by 113 nucleotides
BWI76_RS24610: BWI76_RS24610 - dihydroxyacetone kinase, at 5,129,618 to 5,131,267
_RS24610
BWI76_RS24615: BWI76_RS24615 - siderophore-interacting protein, at 5,131,548 to 5,132,321
_RS24615
BWI76_RS24620: BWI76_RS24620 - PadR family transcriptional regulator, at 5,132,558 to 5,133,112
_RS24620
BWI76_RS24625: BWI76_RS24625 - hypothetical protein, at 5,133,226 to 5,133,417
_RS24625
Position (kb) 5131
5132
5133 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5130.574 kb on - strand, within BWI76_RS24610 at 5130.611 kb on - strand, within BWI76_RS24610 at 5130.874 kb on + strand, within BWI76_RS24610 at 5131.315 kb on + strand at 5131.714 kb on + strand, within BWI76_RS24615 at 5131.715 kb on + strand, within BWI76_RS24615 at 5131.716 kb on + strand, within BWI76_RS24615 at 5131.722 kb on - strand, within BWI76_RS24615 at 5131.722 kb on - strand at 5131.727 kb on - strand, within BWI76_RS24615 at 5131.806 kb on + strand, within BWI76_RS24615 at 5131.887 kb on - strand, within BWI76_RS24615 at 5132.048 kb on - strand, within BWI76_RS24615 at 5132.058 kb on - strand, within BWI76_RS24615 at 5132.215 kb on - strand, within BWI76_RS24615 at 5132.304 kb on - strand at 5132.304 kb on - strand at 5132.588 kb on - strand at 5132.764 kb on - strand at 5132.940 kb on + strand, within BWI76_RS24620 at 5132.960 kb on - strand, within BWI76_RS24620 at 5132.960 kb on - strand, within BWI76_RS24620 at 5132.960 kb on - strand, within BWI76_RS24620 at 5132.977 kb on + strand, within BWI76_RS24620 at 5133.122 kb on - strand at 5133.188 kb on - strand at 5133.282 kb on + strand, within BWI76_RS24625 at 5133.309 kb on + strand, within BWI76_RS24625 at 5133.317 kb on - strand, within BWI76_RS24625
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB1 MOI 10 remove 5,130,574 - BWI76_RS24610 0.58 +0.2 5,130,611 - BWI76_RS24610 0.60 -0.1 5,130,874 + BWI76_RS24610 0.76 -0.6 5,131,315 + -1.5 5,131,714 + BWI76_RS24615 0.21 -2.1 5,131,715 + BWI76_RS24615 0.22 +1.6 5,131,716 + BWI76_RS24615 0.22 +0.6 5,131,722 - BWI76_RS24615 0.22 +1.0 5,131,722 - +2.6 5,131,727 - BWI76_RS24615 0.23 +0.8 5,131,806 + BWI76_RS24615 0.33 +0.3 5,131,887 - BWI76_RS24615 0.44 +3.0 5,132,048 - BWI76_RS24615 0.65 +0.4 5,132,058 - BWI76_RS24615 0.66 +0.5 5,132,215 - BWI76_RS24615 0.86 +0.7 5,132,304 - -0.3 5,132,304 - +0.2 5,132,588 - -1.9 5,132,764 - -0.2 5,132,940 + BWI76_RS24620 0.69 +1.3 5,132,960 - BWI76_RS24620 0.72 -0.1 5,132,960 - BWI76_RS24620 0.72 +0.7 5,132,960 - BWI76_RS24620 0.72 -1.0 5,132,977 + BWI76_RS24620 0.75 +0.1 5,133,122 - +1.8 5,133,188 - +0.5 5,133,282 + BWI76_RS24625 0.29 +0.4 5,133,309 + BWI76_RS24625 0.43 +0.6 5,133,317 - BWI76_RS24625 0.47 +0.7
Or see this region's nucleotide sequence