Experiment: KLEB1 MOI 10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20605 and BWI76_RS20610 are separated by 122 nucleotides BWI76_RS20610 and BWI76_RS20615 are separated by 89 nucleotides
BWI76_RS20605: BWI76_RS20605 - purine-nucleoside phosphorylase, at 4,311,784 to 4,312,617
_RS20605
BWI76_RS20610: BWI76_RS20610 - LysR family transcriptional regulator, at 4,312,740 to 4,313,666
_RS20610
BWI76_RS20615: BWI76_RS20615 - sodium symporter, at 4,313,756 to 4,314,754
_RS20615
Position (kb) 4312
4313
4314 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 4311.811 kb on + strand at 4311.927 kb on + strand, within BWI76_RS20605 at 4312.190 kb on - strand, within BWI76_RS20605 at 4312.320 kb on + strand, within BWI76_RS20605 at 4312.378 kb on + strand, within BWI76_RS20605 at 4312.577 kb on + strand at 4312.621 kb on - strand at 4313.394 kb on - strand, within BWI76_RS20610 at 4313.416 kb on + strand, within BWI76_RS20610 at 4313.476 kb on + strand, within BWI76_RS20610 at 4313.493 kb on - strand, within BWI76_RS20610 at 4313.530 kb on - strand, within BWI76_RS20610 at 4313.582 kb on + strand at 4313.590 kb on - strand at 4313.602 kb on - strand at 4313.924 kb on - strand, within BWI76_RS20615 at 4314.152 kb on + strand, within BWI76_RS20615 at 4314.227 kb on + strand, within BWI76_RS20615 at 4314.234 kb on + strand, within BWI76_RS20615 at 4314.242 kb on - strand, within BWI76_RS20615 at 4314.604 kb on + strand, within BWI76_RS20615
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB1 MOI 10 remove 4,311,811 + +0.3 4,311,927 + BWI76_RS20605 0.17 -1.0 4,312,190 - BWI76_RS20605 0.49 -2.4 4,312,320 + BWI76_RS20605 0.64 -1.3 4,312,378 + BWI76_RS20605 0.71 -0.7 4,312,577 + +0.0 4,312,621 - -2.7 4,313,394 - BWI76_RS20610 0.71 -3.4 4,313,416 + BWI76_RS20610 0.73 -0.2 4,313,476 + BWI76_RS20610 0.79 -0.2 4,313,493 - BWI76_RS20610 0.81 -0.2 4,313,530 - BWI76_RS20610 0.85 +0.0 4,313,582 + +0.3 4,313,590 - -4.0 4,313,602 - -0.6 4,313,924 - BWI76_RS20615 0.17 +1.1 4,314,152 + BWI76_RS20615 0.40 -1.0 4,314,227 + BWI76_RS20615 0.47 -1.4 4,314,234 + BWI76_RS20615 0.48 +0.4 4,314,242 - BWI76_RS20615 0.49 +0.2 4,314,604 + BWI76_RS20615 0.85 -0.8
Or see this region's nucleotide sequence