Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18695

Experiment: KLEB1 MOI 10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB1 MOI 10
3,875,775	+		BWI76_RS18690	0.52	+0.5
3,875,783	-		BWI76_RS18690	0.53	+0.4
3,875,835	-		BWI76_RS18690	0.56	-3.7
3,875,912	-		BWI76_RS18690	0.61	-0.3
3,875,945	+		BWI76_RS18690	0.63	-0.4
3,875,945	+		BWI76_RS18690	0.63	-1.3
3,875,945	+		BWI76_RS18690	0.63	-0.4
3,875,945	+				+5.1
3,875,953	-		BWI76_RS18690	0.64	-1.8
3,875,953	-		BWI76_RS18690	0.64	-0.9
3,875,953	-		BWI76_RS18690	0.64	-1.2
3,875,953	-		BWI76_RS18690	0.64	+1.8
3,875,953	-		BWI76_RS18690	0.64	+0.7
3,875,953	-		BWI76_RS18690	0.64	-1.3
3,875,953	-		BWI76_RS18690	0.64	+1.5
3,876,083	+		BWI76_RS18690	0.72	-0.8
3,876,083	+		BWI76_RS18690	0.72	-2.6
3,876,083	+		BWI76_RS18690	0.72	+1.2
3,876,091	-		BWI76_RS18690	0.73	+1.2
3,876,091	-		BWI76_RS18690	0.73	-0.9
3,876,153	+		BWI76_RS18690	0.77	+1.4
3,876,161	-		BWI76_RS18690	0.77	+1.5
3,876,161	-		BWI76_RS18690	0.77	+1.2
3,876,161	-		BWI76_RS18690	0.77	+0.5
3,876,161	-		BWI76_RS18690	0.77	-0.3
3,876,194	+		BWI76_RS18690	0.79	-0.5
3,876,194	+		BWI76_RS18690	0.79	+0.5
3,876,229	+		BWI76_RS18690	0.82	-2.6
3,876,283	-		BWI76_RS18690	0.85	+0.4
3,876,298	+		BWI76_RS18690	0.86	-0.3
3,876,304	+		BWI76_RS18690	0.86	-1.7
3,876,316	+		BWI76_RS18690	0.87	-2.8
3,876,336	+		BWI76_RS18690	0.89	-0.6
3,876,344	-		BWI76_RS18690	0.89	-1.3
3,876,344	-		BWI76_RS18690	0.89	-0.2
3,876,344	-		BWI76_RS18690	0.89	-1.1
3,876,391	-				+0.7
3,876,422	-				-0.0
3,876,427	-				-1.5
3,876,431	+				-0.3
3,876,452	+				+0.4
3,876,452	+				+0.5
3,876,460	-				+1.0
3,876,460	-				+1.2
3,876,460	-				-3.8
3,876,460	-				-1.6
3,876,460	-				+1.3
3,876,460	-				+0.2
3,876,460	-				+1.4
3,876,462	+				+0.4
3,876,468	+				+0.5
3,876,470	-				+0.9
3,876,470	-				-0.1
3,876,470	-				+0.1
3,876,476	-				-0.4
3,876,517	+				-0.8
3,876,525	-				-0.0
3,876,525	-				-1.8
3,876,527	+				+0.1
3,876,587	-				-1.3
3,876,672	+				-2.2
3,876,834	+				+0.0
3,876,872	-		BWI76_RS18695	0.15	-2.3
3,876,892	-		BWI76_RS18695	0.17	-1.0
3,876,921	-				+0.5
3,877,107	-		BWI76_RS18695	0.48	-1.9
3,877,131	-		BWI76_RS18695	0.52	-3.2
3,877,140	-		BWI76_RS18695	0.53	+0.8
3,877,161	+		BWI76_RS18695	0.56	-3.5
3,877,161	+		BWI76_RS18695	0.56	-2.8
3,877,182	+		BWI76_RS18695	0.59	-0.0
3,877,182	+				+1.5
3,877,182	+		BWI76_RS18695	0.59	-1.9
3,877,317	-		BWI76_RS18695	0.78	-1.3
3,877,492	+				+1.1
3,877,497	+				-0.3
3,877,502	+				-0.1
3,877,502	+				+0.3
3,877,502	+				+0.7
3,877,502	+				+0.0
3,877,502	+				-0.8
3,877,510	-				+0.2
3,877,510	-				-3.5
3,877,510	-				-0.9
3,877,510	-				-0.8
3,877,510	-				-2.6
3,877,535	-				+0.4
3,877,552	+				-0.7
3,877,553	-				+0.4
3,877,556	-				-1.3
3,877,560	+				+0.1
3,877,560	+				-4.3
3,877,567	-				+0.9
3,877,568	-				+0.1
3,877,602	+		BWI76_RS18700	0.14	-1.3
3,877,602	+		BWI76_RS18700	0.14	+0.8
3,877,610	-		BWI76_RS18700	0.17	+0.5
3,877,615	+		BWI76_RS18700	0.18	-0.5
3,877,615	+		BWI76_RS18700	0.18	+1.2
3,877,645	-		BWI76_RS18700	0.27	+0.1
3,877,651	+		BWI76_RS18700	0.29	+0.6
3,877,658	-		BWI76_RS18700	0.31	+0.3
3,877,658	-		BWI76_RS18700	0.31	+0.7
3,877,740	+		BWI76_RS18700	0.55	-2.6
3,877,742	-		BWI76_RS18700	0.56	+1.0
3,877,748	-		BWI76_RS18700	0.58	-4.1
3,877,762	+		BWI76_RS18700	0.62	-1.0
3,877,780	-		BWI76_RS18700	0.67	+0.1
3,877,785	-		BWI76_RS18700	0.68	-1.5
3,877,792	-		BWI76_RS18700	0.71	+1.0
3,877,803	-		BWI76_RS18700	0.74	-0.7
3,877,810	+		BWI76_RS18700	0.76	+3.4
3,877,810	+		BWI76_RS18700	0.76	-0.5
3,877,818	-		BWI76_RS18700	0.78	-1.6
3,877,818	-		BWI76_RS18700	0.78	+1.5
3,877,818	-		BWI76_RS18700	0.78	+0.4
3,877,818	-		BWI76_RS18700	0.78	-1.4
3,877,818	-		BWI76_RS18700	0.78	-0.4
3,877,858	+				+1.6
3,877,865	+				-2.2
3,877,866	-				+2.5
3,877,873	-				-0.5
3,877,873	-				+0.7
3,877,879	-				+0.7
3,877,891	+				+1.1
3,877,894	-				+0.9
3,877,899	+				-3.7
3,877,924	-				+1.5
3,878,023	+		BWI76_RS18705	0.37	-0.5
3,878,031	-		BWI76_RS18705	0.39	-0.6
3,878,038	-		BWI76_RS18705	0.41	-0.7
3,878,040	+		BWI76_RS18705	0.42	+0.8
3,878,045	+		BWI76_RS18705	0.44	+0.1
3,878,048	-		BWI76_RS18705	0.44	-1.3
3,878,048	-		BWI76_RS18705	0.44	-0.9
3,878,048	-		BWI76_RS18705	0.44	-0.3
3,878,048	-		BWI76_RS18705	0.44	+0.5
3,878,048	-		BWI76_RS18705	0.44	-0.3
3,878,048	-		BWI76_RS18705	0.44	-0.0
3,878,048	-		BWI76_RS18705	0.44	-1.0
3,878,048	-		BWI76_RS18705	0.44	-3.4
3,878,050	+		BWI76_RS18705	0.45	-2.6
3,878,050	+		BWI76_RS18705	0.45	+2.3
3,878,050	+		BWI76_RS18705	0.45	+1.8
3,878,050	+		BWI76_RS18705	0.45	+0.4
3,878,050	+		BWI76_RS18705	0.45	+0.6
3,878,050	+		BWI76_RS18705	0.45	+0.1
3,878,053	-		BWI76_RS18705	0.46	+0.6
3,878,055	+		BWI76_RS18705	0.47	-0.5
3,878,058	-		BWI76_RS18705	0.47	-0.0
3,878,058	-		BWI76_RS18705	0.47	+1.4
3,878,058	-		BWI76_RS18705	0.47	-2.5
3,878,058	-		BWI76_RS18705	0.47	+0.7
3,878,094	-		BWI76_RS18705	0.58	+0.0
3,878,103	-		BWI76_RS18705	0.61	-1.3
3,878,110	-		BWI76_RS18705	0.63	+0.8
3,878,149	+		BWI76_RS18705	0.75	-0.4
3,878,157	-		BWI76_RS18705	0.77	+1.0
3,878,157	-		BWI76_RS18705	0.77	-3.2
3,878,174	+		BWI76_RS18705	0.82	-1.1
3,878,182	-		BWI76_RS18705	0.85	+0.4
3,878,188	+		BWI76_RS18705	0.86	-1.1
3,878,191	-		BWI76_RS18705	0.87	-3.4
3,878,194	+		BWI76_RS18705	0.88	+2.1
3,878,194	+		BWI76_RS18705	0.88	-0.4
3,878,202	-				+0.7
3,878,202	-				+0.5
3,878,206	-				-2.3
3,878,243	+				+0.6
3,878,254	+				-0.6
3,878,334	+				-0.8
3,878,341	+				+0.6
3,878,455	+				-0.5