Experiment: KLEB1 MOI 10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09155 and BWI76_RS09160 are separated by 318 nucleotides BWI76_RS09160 and BWI76_RS09165 are separated by 47 nucleotides BWI76_RS09165 and BWI76_RS09170 overlap by 1 nucleotides
BWI76_RS09155: BWI76_RS09155 - undecaprenyl-diphosphatase, at 1,934,075 to 1,934,668
_RS09155
BWI76_RS09160: BWI76_RS09160 - multidrug transporter MdfA, at 1,934,987 to 1,936,222
_RS09160
BWI76_RS09165: BWI76_RS09165 - phosphatase YbjI, at 1,936,270 to 1,937,085
_RS09165
BWI76_RS09170: BWI76_RS09170 - MFS transporter, at 1,937,085 to 1,938,287
_RS09170
Position (kb) 1934
1935
1936
1937 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 1934.328 kb on - strand, within BWI76_RS09155 at 1934.407 kb on - strand, within BWI76_RS09155 at 1934.407 kb on - strand, within BWI76_RS09155 at 1934.410 kb on + strand, within BWI76_RS09155 at 1934.523 kb on + strand, within BWI76_RS09155 at 1934.625 kb on + strand at 1934.625 kb on + strand at 1934.625 kb on + strand at 1934.625 kb on + strand at 1934.625 kb on + strand at 1934.625 kb on + strand at 1934.633 kb on - strand at 1934.633 kb on - strand at 1934.633 kb on - strand at 1934.633 kb on - strand at 1934.678 kb on - strand at 1934.697 kb on - strand at 1934.737 kb on - strand at 1934.737 kb on - strand at 1934.801 kb on + strand at 1934.803 kb on + strand at 1934.819 kb on + strand at 1934.819 kb on + strand at 1934.891 kb on - strand at 1934.892 kb on - strand at 1934.920 kb on + strand at 1934.955 kb on - strand at 1934.964 kb on + strand at 1935.016 kb on + strand at 1935.016 kb on + strand at 1935.016 kb on + strand at 1935.022 kb on + strand at 1935.024 kb on - strand at 1935.024 kb on - strand at 1935.037 kb on - strand at 1935.042 kb on - strand at 1935.053 kb on + strand at 1935.087 kb on + strand at 1935.109 kb on - strand at 1935.149 kb on - strand, within BWI76_RS09160 at 1935.244 kb on + strand, within BWI76_RS09160 at 1935.244 kb on + strand, within BWI76_RS09160 at 1935.331 kb on + strand, within BWI76_RS09160 at 1935.341 kb on - strand, within BWI76_RS09160 at 1935.341 kb on - strand, within BWI76_RS09160 at 1935.394 kb on + strand, within BWI76_RS09160 at 1936.073 kb on - strand, within BWI76_RS09160 at 1936.299 kb on - strand at 1936.360 kb on + strand, within BWI76_RS09165 at 1936.463 kb on - strand, within BWI76_RS09165 at 1936.472 kb on + strand, within BWI76_RS09165 at 1936.479 kb on - strand, within BWI76_RS09165 at 1936.535 kb on + strand at 1936.543 kb on - strand, within BWI76_RS09165 at 1936.922 kb on - strand, within BWI76_RS09165 at 1937.081 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB1 MOI 10 remove 1,934,328 - BWI76_RS09155 0.43 -0.9 1,934,407 - BWI76_RS09155 0.56 -0.1 1,934,407 - BWI76_RS09155 0.56 +2.0 1,934,410 + BWI76_RS09155 0.56 -2.3 1,934,523 + BWI76_RS09155 0.75 +0.5 1,934,625 + +0.2 1,934,625 + -1.0 1,934,625 + -4.2 1,934,625 + +0.1 1,934,625 + +0.5 1,934,625 + +2.5 1,934,633 - +1.8 1,934,633 - +1.2 1,934,633 - -0.5 1,934,633 - +1.1 1,934,678 - +0.1 1,934,697 - -2.7 1,934,737 - +1.6 1,934,737 - +0.2 1,934,801 + -1.1 1,934,803 + -0.5 1,934,819 + -0.9 1,934,819 + +0.3 1,934,891 - -1.2 1,934,892 - -0.5 1,934,920 + -0.7 1,934,955 - -0.1 1,934,964 + -1.1 1,935,016 + +1.5 1,935,016 + +0.8 1,935,016 + +0.5 1,935,022 + +1.1 1,935,024 - -1.3 1,935,024 - +0.2 1,935,037 - -1.0 1,935,042 - -2.9 1,935,053 + -0.8 1,935,087 + +0.4 1,935,109 - -0.2 1,935,149 - BWI76_RS09160 0.13 -1.1 1,935,244 + BWI76_RS09160 0.21 -3.5 1,935,244 + BWI76_RS09160 0.21 -0.3 1,935,331 + BWI76_RS09160 0.28 -0.1 1,935,341 - BWI76_RS09160 0.29 -1.9 1,935,341 - BWI76_RS09160 0.29 -3.2 1,935,394 + BWI76_RS09160 0.33 -0.7 1,936,073 - BWI76_RS09160 0.88 -2.6 1,936,299 - -0.3 1,936,360 + BWI76_RS09165 0.11 +0.1 1,936,463 - BWI76_RS09165 0.24 -3.9 1,936,472 + BWI76_RS09165 0.25 -4.0 1,936,479 - BWI76_RS09165 0.26 -0.4 1,936,535 + -1.6 1,936,543 - BWI76_RS09165 0.33 -0.9 1,936,922 - BWI76_RS09165 0.80 -3.3 1,937,081 - +1.0
Or see this region's nucleotide sequence