Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05090

Experiment: KLEB1 MOI 10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB1 MOI 10
1,064,444	-		BWI76_RS05085	0.44	+1.0
1,064,484	-				+1.3
1,064,681	-		BWI76_RS05085	0.60	-1.1
1,065,011	-		BWI76_RS05085	0.82	+2.5
1,065,020	-		BWI76_RS05085	0.82	+0.3
1,065,051	+		BWI76_RS05085	0.84	-1.8
1,065,052	-		BWI76_RS05085	0.84	-1.7
1,065,184	+				+0.7
1,065,207	-				-0.4
1,065,211	+				-0.2
1,065,219	-				+1.1
1,065,327	-				+0.0
1,065,446	+				+2.1
1,065,446	+				+0.1
1,065,451	+				-1.9
1,065,704	-		BWI76_RS05090	0.21	+1.4
1,065,797	+		BWI76_RS05090	0.26	-2.6
1,065,805	-		BWI76_RS05090	0.26	+0.1
1,065,966	+		BWI76_RS05090	0.34	-0.3
1,065,972	+		BWI76_RS05090	0.35	+0.3
1,066,043	-		BWI76_RS05090	0.38	+1.1
1,066,088	-		BWI76_RS05090	0.41	-0.5
1,066,149	+		BWI76_RS05090	0.44	-0.5
1,066,421	+		BWI76_RS05090	0.57	+0.0
1,066,429	-		BWI76_RS05090	0.58	+0.7
1,066,464	+		BWI76_RS05090	0.60	+0.9
1,066,464	+		BWI76_RS05090	0.60	-0.9
1,066,472	-		BWI76_RS05090	0.60	+1.3
1,066,472	-		BWI76_RS05090	0.60	+0.4
1,066,598	+		BWI76_RS05090	0.66	-3.2
1,066,786	-		BWI76_RS05090	0.76	+0.7
1,066,787	+		BWI76_RS05090	0.76	-0.4
1,066,795	-		BWI76_RS05090	0.76	+1.8
1,066,795	-		BWI76_RS05090	0.76	+1.0
1,066,868	-		BWI76_RS05090	0.80	-2.0
1,066,868	-		BWI76_RS05090	0.80	+0.6
1,066,909	+		BWI76_RS05090	0.82	+1.2
1,066,960	+		BWI76_RS05090	0.85	-0.9
1,066,968	-		BWI76_RS05090	0.85	+0.6
1,066,972	+		BWI76_RS05090	0.85	-0.3
1,066,998	+		BWI76_RS05090	0.87	+0.1
1,067,006	+		BWI76_RS05090	0.87	+3.0
1,067,006	+				-0.7
1,067,006	+		BWI76_RS05090	0.87	-0.3
1,067,006	+		BWI76_RS05090	0.87	+0.8
1,067,006	+		BWI76_RS05090	0.87	-0.1
1,067,007	-		BWI76_RS05090	0.87	+0.6
1,067,014	-		BWI76_RS05090	0.87	+0.0
1,067,014	-		BWI76_RS05090	0.87	+0.7
1,067,014	-		BWI76_RS05090	0.87	+0.9
1,067,014	-		BWI76_RS05090	0.87	+2.3
1,067,014	-		BWI76_RS05090	0.87	-2.6
1,067,014	-				-1.9
1,067,014	-		BWI76_RS05090	0.87	-0.4
1,067,014	-		BWI76_RS05090	0.87	+0.5
1,067,014	-		BWI76_RS05090	0.87	-3.6
1,067,014	-		BWI76_RS05090	0.87	+0.8
1,067,014	-		BWI76_RS05090	0.87	-0.6
1,067,015	+				-1.3
1,067,028	-		BWI76_RS05090	0.88	-4.4
1,067,034	+		BWI76_RS05090	0.88	-0.7
1,067,035	-		BWI76_RS05090	0.88	+0.2
1,067,042	-		BWI76_RS05090	0.89	+1.8
1,067,044	+		BWI76_RS05090	0.89	+0.8
1,067,049	+		BWI76_RS05090	0.89	+0.4
1,067,051	+		BWI76_RS05090	0.89	+0.5
1,067,054	+		BWI76_RS05090	0.89	-0.2
1,067,054	+		BWI76_RS05090	0.89	-3.1
1,067,054	+		BWI76_RS05090	0.89	+0.4
1,067,059	-		BWI76_RS05090	0.90	-0.1
1,067,062	-		BWI76_RS05090	0.90	+0.3
1,067,062	-		BWI76_RS05090	0.90	+0.9
1,067,062	-		BWI76_RS05090	0.90	-0.7
1,067,062	-		BWI76_RS05090	0.90	-2.4
1,067,064	-		BWI76_RS05090	0.90	-0.1
1,067,069	+				+0.1
1,067,069	+				+0.5
1,067,069	+				+1.1
1,067,069	+				-0.3
1,067,069	+				-1.9
1,067,069	+				-0.0
1,067,069	+				-0.1
1,067,069	+				+0.3
1,067,069	+				+0.8
1,067,069	+				-1.0
1,067,069	+				-1.3
1,067,069	+				+0.5
1,067,069	+				+0.2
1,067,069	+				+0.4
1,067,069	+				+0.6
1,067,069	+				-0.7
1,067,069	+				-0.3
1,067,069	+				+1.1
1,067,069	+				+0.5
1,067,069	+				+0.2
1,067,072	-				-1.0
1,067,077	-				+1.0
1,067,077	-				+1.0
1,067,077	-				+0.4
1,067,077	-				+1.0
1,067,077	-				+0.3
1,067,077	-				+0.9
1,067,077	-				-1.1
1,067,077	-				-2.7
1,067,077	-				-0.4
1,067,077	-				-1.4
1,067,077	-				+1.2
1,067,077	-				-0.5
1,067,077	-				-0.3
1,067,077	-				-0.1
1,067,077	-				-4.0
1,067,077	-				-0.1
1,067,077	-				-2.3
1,067,077	-				+0.7
1,067,077	-				+0.4
1,067,077	-				-0.5
1,067,077	-				-0.0
1,067,077	-				-2.7
1,067,077	-				-1.0
1,067,077	-				+0.9
1,067,077	-				+0.5
1,067,077	-				+0.5
1,067,077	-				+1.0
1,067,077	-				+1.3
1,067,077	-				-0.2
1,067,077	-				+0.5
1,067,080	-				+0.9
1,067,087	+				-0.4
1,067,093	+				-1.6
1,067,095	-				-0.1
1,067,136	+				-1.7
1,067,159	+				+0.9
1,067,159	+				+0.3
1,067,159	+				+0.1
1,067,159	+				-1.0
1,067,159	+				-0.1
1,067,159	+				-0.6
1,067,159	+				-2.2
1,067,159	+				+1.4
1,067,159	+				+0.1
1,067,167	-				-0.7
1,067,167	-				+0.3
1,067,167	-				+0.3
1,067,167	-				-0.3
1,067,167	-				-0.7
1,067,194	+				-2.2
1,067,199	+				+2.1
1,067,199	+				+0.5
1,067,199	+				+0.9
1,067,199	+				+1.2
1,067,215	+				+1.0
1,067,223	-				-0.0
1,067,225	+				-2.9
1,067,225	-				-1.5
1,067,225	-				-4.3
1,067,249	+				-0.5
1,067,319	+				+0.6
1,067,326	-				-0.0
1,067,326	-				+2.1
1,067,351	+		BWI76_RS05095	0.10	-0.7
1,067,351	+		BWI76_RS05095	0.10	-1.2
1,067,352	+		BWI76_RS05095	0.10	-0.4
1,067,352	+		BWI76_RS05095	0.10	+0.8
1,067,352	+		BWI76_RS05095	0.10	-2.7
1,067,352	+		BWI76_RS05095	0.10	-5.1
1,067,352	+		BWI76_RS05095	0.10	+0.4
1,067,352	+		BWI76_RS05095	0.10	-0.6
1,067,352	+		BWI76_RS05095	0.10	-0.1
1,067,352	+		BWI76_RS05095	0.10	+0.4
1,067,352	+		BWI76_RS05095	0.10	-2.6
1,067,352	+		BWI76_RS05095	0.10	+0.3
1,067,352	+		BWI76_RS05095	0.10	-4.5
1,067,352	+		BWI76_RS05095	0.10	+0.6
1,067,360	-		BWI76_RS05095	0.11	+0.4
1,067,360	-		BWI76_RS05095	0.11	+0.8
1,067,360	-		BWI76_RS05095	0.11	-1.0
1,067,360	-		BWI76_RS05095	0.11	+1.1
1,067,360	-		BWI76_RS05095	0.11	+0.3
1,067,360	-		BWI76_RS05095	0.11	-0.4
1,067,361	-		BWI76_RS05095	0.11	+1.7
1,067,370	-		BWI76_RS05095	0.12	+0.4
1,067,372	+		BWI76_RS05095	0.13	-1.0
1,067,375	-		BWI76_RS05095	0.13	+0.6
1,067,375	-		BWI76_RS05095	0.13	-1.0
1,067,383	+		BWI76_RS05095	0.14	+2.5
1,067,383	+		BWI76_RS05095	0.14	+0.1
1,067,387	+		BWI76_RS05095	0.15	+1.5
1,067,395	-		BWI76_RS05095	0.15	-1.7
1,067,395	-		BWI76_RS05095	0.15	+1.8
1,067,395	-		BWI76_RS05095	0.15	+1.9
1,067,396	-		BWI76_RS05095	0.16	+0.3
1,067,397	+		BWI76_RS05095	0.16	-2.3
1,067,397	+		BWI76_RS05095	0.16	+1.7
1,067,397	+		BWI76_RS05095	0.16	+1.1
1,067,397	+		BWI76_RS05095	0.16	-0.4
1,067,397	+		BWI76_RS05095	0.16	-0.3
1,067,397	+		BWI76_RS05095	0.16	+0.1
1,067,397	+		BWI76_RS05095	0.16	+0.7
1,067,397	+		BWI76_RS05095	0.16	+2.9
1,067,397	+		BWI76_RS05095	0.16	+0.6
1,067,397	+		BWI76_RS05095	0.16	+0.5
1,067,397	+		BWI76_RS05095	0.16	+0.0
1,067,397	+		BWI76_RS05095	0.16	-3.9
1,067,397	+		BWI76_RS05095	0.16	-1.0
1,067,397	+		BWI76_RS05095	0.16	+0.2
1,067,397	+		BWI76_RS05095	0.16	-0.1
1,067,397	+		BWI76_RS05095	0.16	+2.2
1,067,397	+		BWI76_RS05095	0.16	-0.3
1,067,397	+		BWI76_RS05095	0.16	-0.8
1,067,397	+		BWI76_RS05095	0.16	+0.4
1,067,397	+		BWI76_RS05095	0.16	-0.2
1,067,397	+		BWI76_RS05095	0.16	-0.2
1,067,397	+		BWI76_RS05095	0.16	+0.5
1,067,405	-		BWI76_RS05095	0.17	-0.2
1,067,405	-		BWI76_RS05095	0.17	-0.9
1,067,405	-		BWI76_RS05095	0.17	+1.3
1,067,405	-		BWI76_RS05095	0.17	-0.1
1,067,405	-		BWI76_RS05095	0.17	-0.7
1,067,405	-		BWI76_RS05095	0.17	+1.2
1,067,405	-		BWI76_RS05095	0.17	-0.6
1,067,405	-		BWI76_RS05095	0.17	+0.3
1,067,405	-		BWI76_RS05095	0.17	+0.6
1,067,405	-		BWI76_RS05095	0.17	+0.7
1,067,405	-		BWI76_RS05095	0.17	-1.1
1,067,405	-		BWI76_RS05095	0.17	+0.4
1,067,465	+		BWI76_RS05095	0.24	+1.2
1,067,473	-		BWI76_RS05095	0.25	-0.6
1,067,473	-		BWI76_RS05095	0.25	-2.0
1,067,473	-		BWI76_RS05095	0.25	+1.1
1,067,473	-		BWI76_RS05095	0.25	-2.8
1,067,473	-		BWI76_RS05095	0.25	+0.6
1,067,473	-		BWI76_RS05095	0.25	-0.3
1,067,496	+		BWI76_RS05095	0.28	-2.4
1,067,504	-		BWI76_RS05095	0.28	+0.7
1,067,504	-		BWI76_RS05095	0.28	+0.9
1,067,505	-		BWI76_RS05095	0.29	-0.3
1,067,550	+		BWI76_RS05095	0.34	+0.5
1,067,550	+		BWI76_RS05095	0.34	-0.9
1,067,550	+		BWI76_RS05095	0.34	-1.0
1,067,620	+		BWI76_RS05095	0.42	-1.0
1,067,730	-		BWI76_RS05095	0.55	-0.1
1,067,789	+		BWI76_RS05095	0.62	-3.2
1,067,789	+		BWI76_RS05095	0.62	+1.3
1,067,872	+		BWI76_RS05095	0.72	+1.1
1,067,874	+		BWI76_RS05095	0.72	-0.7
1,067,880	-		BWI76_RS05095	0.73	+0.8
1,067,880	-		BWI76_RS05095	0.73	-3.3
1,067,882	+		BWI76_RS05095	0.73	+2.0
1,067,882	+		BWI76_RS05095	0.73	+0.7
1,067,882	+		BWI76_RS05095	0.73	+1.0
1,067,882	+		BWI76_RS05095	0.73	+1.4
1,067,882	-		BWI76_RS05095	0.73	+0.2
1,067,882	-		BWI76_RS05095	0.73	-0.2
1,067,890	-		BWI76_RS05095	0.74	-1.4
1,067,903	+		BWI76_RS05095	0.76	-2.0
1,067,911	-		BWI76_RS05095	0.77	+0.3
1,067,933	+		BWI76_RS05095	0.80	+0.9
1,067,936	-		BWI76_RS05095	0.80	-1.0
1,067,939	-		BWI76_RS05095	0.80	-1.4
1,067,941	-		BWI76_RS05095	0.80	-2.2
1,067,943	+				-0.3
1,067,944	-		BWI76_RS05095	0.81	-0.4
1,067,951	-		BWI76_RS05095	0.82	+3.5
1,067,951	-		BWI76_RS05095	0.82	+1.3
1,067,951	-		BWI76_RS05095	0.82	+1.1
1,067,951	-		BWI76_RS05095	0.82	-1.0
1,067,996	-		BWI76_RS05095	0.87	-0.8
1,068,033	+				-0.6
1,068,041	-				+1.9
1,068,136	+				-0.6
1,068,142	+				+0.2
1,068,143	+				+0.1
1,068,150	-				+0.9
1,068,161	-				-1.5
1,068,161	-				-0.0
1,068,201	+				+0.2
1,068,206	+				-2.6
1,068,206	+				+0.8
1,068,206	+				+0.3
1,068,206	+				+1.3
1,068,209	-				+2.0
1,068,214	-				+0.6
1,068,230	+				+1.4