Experiment: KLEB20 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03505 and BWI76_RS03510 overlap by 1 nucleotides BWI76_RS03510 and BWI76_RS03515 overlap by 4 nucleotides
BWI76_RS03505: BWI76_RS03505 - membrane protein, at 724,332 to 725,456
_RS03505
BWI76_RS03510: BWI76_RS03510 - multidrug ABC transporter ATP-binding protein, at 725,456 to 728,185
_RS03510
BWI76_RS03515: BWI76_RS03515 - hypothetical protein, at 728,182 to 729,249
_RS03515
Position (kb) 725
726
727
728
729 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 724.471 kb on - strand, within BWI76_RS03505 at 724.514 kb on - strand, within BWI76_RS03505 at 724.582 kb on + strand, within BWI76_RS03505 at 724.727 kb on - strand, within BWI76_RS03505 at 724.733 kb on + strand, within BWI76_RS03505 at 724.733 kb on + strand, within BWI76_RS03505 at 725.078 kb on - strand, within BWI76_RS03505 at 725.095 kb on + strand, within BWI76_RS03505 at 725.103 kb on - strand, within BWI76_RS03505 at 725.233 kb on + strand, within BWI76_RS03505 at 725.299 kb on + strand, within BWI76_RS03505 at 725.351 kb on - strand at 725.417 kb on - strand at 725.479 kb on + strand at 725.487 kb on + strand at 725.511 kb on + strand at 725.572 kb on - strand at 725.609 kb on + strand at 725.752 kb on + strand, within BWI76_RS03510 at 725.780 kb on + strand, within BWI76_RS03510 at 725.783 kb on - strand, within BWI76_RS03510 at 725.846 kb on - strand, within BWI76_RS03510 at 725.984 kb on - strand, within BWI76_RS03510 at 726.325 kb on + strand, within BWI76_RS03510 at 726.384 kb on + strand, within BWI76_RS03510 at 726.389 kb on + strand, within BWI76_RS03510 at 726.500 kb on + strand, within BWI76_RS03510 at 726.508 kb on - strand, within BWI76_RS03510 at 726.589 kb on - strand, within BWI76_RS03510 at 727.082 kb on - strand, within BWI76_RS03510 at 727.155 kb on - strand, within BWI76_RS03510 at 727.281 kb on + strand, within BWI76_RS03510 at 727.485 kb on - strand, within BWI76_RS03510 at 727.494 kb on - strand, within BWI76_RS03510 at 727.809 kb on - strand, within BWI76_RS03510 at 727.859 kb on + strand, within BWI76_RS03510 at 727.933 kb on - strand at 727.957 kb on + strand at 728.050 kb on + strand at 728.073 kb on + strand at 728.089 kb on + strand at 728.121 kb on - strand at 728.259 kb on + strand at 728.275 kb on + strand at 728.283 kb on - strand at 728.393 kb on + strand, within BWI76_RS03515 at 728.439 kb on - strand, within BWI76_RS03515 at 728.660 kb on + strand, within BWI76_RS03515 at 729.171 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB20 MOI 0.1 remove 724,471 - BWI76_RS03505 0.12 +0.2 724,514 - BWI76_RS03505 0.16 +0.1 724,582 + BWI76_RS03505 0.22 -1.5 724,727 - BWI76_RS03505 0.35 +1.3 724,733 + BWI76_RS03505 0.36 +2.1 724,733 + BWI76_RS03505 0.36 -0.4 725,078 - BWI76_RS03505 0.66 +0.6 725,095 + BWI76_RS03505 0.68 +0.4 725,103 - BWI76_RS03505 0.69 +1.1 725,233 + BWI76_RS03505 0.80 -0.2 725,299 + BWI76_RS03505 0.86 +0.3 725,351 - +0.1 725,417 - -0.9 725,479 + -1.3 725,487 + +0.8 725,511 + -1.9 725,572 - +0.2 725,609 + +1.3 725,752 + BWI76_RS03510 0.11 -0.2 725,780 + BWI76_RS03510 0.12 -0.2 725,783 - BWI76_RS03510 0.12 +0.6 725,846 - BWI76_RS03510 0.14 +0.4 725,984 - BWI76_RS03510 0.19 +0.4 726,325 + BWI76_RS03510 0.32 +1.0 726,384 + BWI76_RS03510 0.34 -0.1 726,389 + BWI76_RS03510 0.34 -0.0 726,500 + BWI76_RS03510 0.38 +0.2 726,508 - BWI76_RS03510 0.39 +1.0 726,589 - BWI76_RS03510 0.42 +1.2 727,082 - BWI76_RS03510 0.60 +0.4 727,155 - BWI76_RS03510 0.62 -3.2 727,281 + BWI76_RS03510 0.67 -0.0 727,485 - BWI76_RS03510 0.74 +0.2 727,494 - BWI76_RS03510 0.75 +0.3 727,809 - BWI76_RS03510 0.86 +0.8 727,859 + BWI76_RS03510 0.88 +0.7 727,933 - -3.6 727,957 + +0.0 728,050 + +1.0 728,073 + +0.8 728,089 + +0.1 728,121 - +0.9 728,259 + +0.4 728,275 + -2.0 728,283 - +0.6 728,393 + BWI76_RS03515 0.20 +0.5 728,439 - BWI76_RS03515 0.24 -0.1 728,660 + BWI76_RS03515 0.45 +0.5 729,171 + -0.1
Or see this region's nucleotide sequence