Experiment: KLEB20 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24480 and BWI76_RS24485 are separated by 203 nucleotides BWI76_RS24485 and BWI76_RS24490 are separated by 212 nucleotides
BWI76_RS24480: BWI76_RS24480 - undecaprenyl-diphosphatase, at 5,105,680 to 5,106,501
_RS24480
BWI76_RS24485: BWI76_RS24485 - bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase, at 5,106,705 to 5,107,088
_RS24485
BWI76_RS24490: BWI76_RS24490 - glycerol-3-phosphate acyltransferase, at 5,107,301 to 5,107,921
_RS24490
Position (kb) 5106
5107
5108 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5105.858 kb on - strand, within BWI76_RS24480 at 5105.866 kb on - strand, within BWI76_RS24480 at 5106.152 kb on + strand, within BWI76_RS24480 at 5106.205 kb on - strand, within BWI76_RS24480 at 5106.235 kb on - strand, within BWI76_RS24480 at 5106.244 kb on + strand, within BWI76_RS24480 at 5106.252 kb on - strand, within BWI76_RS24480 at 5106.252 kb on - strand, within BWI76_RS24480 at 5106.258 kb on - strand, within BWI76_RS24480 at 5106.414 kb on + strand, within BWI76_RS24480 at 5106.419 kb on + strand at 5106.419 kb on + strand at 5106.419 kb on + strand at 5106.422 kb on - strand at 5106.439 kb on - strand at 5106.479 kb on + strand at 5106.481 kb on - strand at 5106.576 kb on + strand at 5106.584 kb on - strand at 5106.605 kb on + strand at 5106.696 kb on - strand at 5106.719 kb on - strand at 5106.737 kb on + strand at 5106.745 kb on - strand, within BWI76_RS24485 at 5107.147 kb on + strand at 5107.203 kb on + strand at 5107.217 kb on - strand at 5107.224 kb on + strand at 5107.224 kb on + strand at 5107.232 kb on - strand at 5107.253 kb on - strand at 5107.268 kb on + strand at 5107.322 kb on - strand at 5107.577 kb on + strand, within BWI76_RS24490 at 5107.656 kb on + strand, within BWI76_RS24490 at 5107.716 kb on + strand, within BWI76_RS24490 at 5107.736 kb on - strand, within BWI76_RS24490 at 5107.764 kb on - strand, within BWI76_RS24490 at 5107.764 kb on - strand, within BWI76_RS24490 at 5107.764 kb on - strand, within BWI76_RS24490 at 5107.771 kb on + strand at 5107.951 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB20 MOI 1 remove 5,105,858 - BWI76_RS24480 0.22 +0.9 5,105,866 - BWI76_RS24480 0.23 +0.6 5,106,152 + BWI76_RS24480 0.57 +0.8 5,106,205 - BWI76_RS24480 0.64 +0.1 5,106,235 - BWI76_RS24480 0.68 +1.5 5,106,244 + BWI76_RS24480 0.69 +0.0 5,106,252 - BWI76_RS24480 0.70 -0.7 5,106,252 - BWI76_RS24480 0.70 -1.9 5,106,258 - BWI76_RS24480 0.70 +0.8 5,106,414 + BWI76_RS24480 0.89 -0.2 5,106,419 + -1.2 5,106,419 + +0.5 5,106,419 + +0.9 5,106,422 - +1.3 5,106,439 - -1.5 5,106,479 + +2.3 5,106,481 - +1.1 5,106,576 + -0.1 5,106,584 - -1.6 5,106,605 + -1.9 5,106,696 - -2.4 5,106,719 - +0.2 5,106,737 + -1.7 5,106,745 - BWI76_RS24485 0.10 -1.2 5,107,147 + +1.3 5,107,203 + -2.1 5,107,217 - -0.9 5,107,224 + -0.9 5,107,224 + -0.9 5,107,232 - -0.2 5,107,253 - +0.0 5,107,268 + -0.3 5,107,322 - -0.5 5,107,577 + BWI76_RS24490 0.44 -1.7 5,107,656 + BWI76_RS24490 0.57 +0.3 5,107,716 + BWI76_RS24490 0.67 +0.4 5,107,736 - BWI76_RS24490 0.70 +2.2 5,107,764 - BWI76_RS24490 0.75 +0.9 5,107,764 - BWI76_RS24490 0.75 -0.8 5,107,764 - BWI76_RS24490 0.75 +0.8 5,107,771 + +2.0 5,107,951 - +0.5
Or see this region's nucleotide sequence