Experiment: KLEB20 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20690 and BWI76_RS20695 overlap by 11 nucleotides BWI76_RS20695 and BWI76_RS20700 overlap by 1 nucleotides BWI76_RS20700 and BWI76_RS20705 overlap by 1 nucleotides
BWI76_RS20690: BWI76_RS20690 - sulfate ABC transporter ATP-binding protein, at 4,327,867 to 4,328,961
_RS20690
BWI76_RS20695: BWI76_RS20695 - sulfate/thiosulfate transporter permease subunit, at 4,328,951 to 4,329,826
_RS20695
BWI76_RS20700: BWI76_RS20700 - sulfate/thiosulfate transporter subunit, at 4,329,826 to 4,330,659
_RS20700
BWI76_RS20705: BWI76_RS20705 - thiosulfate transporter subunit, at 4,330,659 to 4,331,675
_RS20705
Position (kb) 4328
4329
4330 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4327.979 kb on + strand, within BWI76_RS20690 at 4328.069 kb on + strand, within BWI76_RS20690 at 4328.214 kb on - strand, within BWI76_RS20690 at 4328.633 kb on + strand, within BWI76_RS20690 at 4328.766 kb on + strand, within BWI76_RS20690 at 4328.766 kb on + strand, within BWI76_RS20690 at 4328.785 kb on + strand, within BWI76_RS20690 at 4328.885 kb on - strand at 4328.914 kb on - strand at 4329.541 kb on - strand, within BWI76_RS20695 at 4329.542 kb on + strand, within BWI76_RS20695 at 4329.550 kb on - strand, within BWI76_RS20695 at 4329.748 kb on + strand at 4329.874 kb on - strand at 4330.165 kb on + strand, within BWI76_RS20700 at 4330.224 kb on - strand, within BWI76_RS20700 at 4330.325 kb on - strand, within BWI76_RS20700 at 4330.512 kb on + strand, within BWI76_RS20700 at 4330.514 kb on + strand, within BWI76_RS20700 at 4330.520 kb on - strand, within BWI76_RS20700
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB20 MOI 1 remove 4,327,979 + BWI76_RS20690 0.10 -0.9 4,328,069 + BWI76_RS20690 0.18 +1.0 4,328,214 - BWI76_RS20690 0.32 -0.2 4,328,633 + BWI76_RS20690 0.70 -0.2 4,328,766 + BWI76_RS20690 0.82 -0.6 4,328,766 + BWI76_RS20690 0.82 -2.0 4,328,785 + BWI76_RS20690 0.84 +0.3 4,328,885 - -0.2 4,328,914 - -0.1 4,329,541 - BWI76_RS20695 0.67 -0.8 4,329,542 + BWI76_RS20695 0.67 -0.6 4,329,550 - BWI76_RS20695 0.68 -2.6 4,329,748 + -0.4 4,329,874 - -0.5 4,330,165 + BWI76_RS20700 0.41 +0.5 4,330,224 - BWI76_RS20700 0.48 -1.0 4,330,325 - BWI76_RS20700 0.60 +0.6 4,330,512 + BWI76_RS20700 0.82 -2.8 4,330,514 + BWI76_RS20700 0.82 +0.4 4,330,520 - BWI76_RS20700 0.83 -0.4
Or see this region's nucleotide sequence