Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20530
Experiment: KLEB20 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB20 MOI 1 |
---|---|---|---|---|---|
remove | |||||
4,299,756 | - | BWI76_RS20525 | 0.39 | -0.7 | |
4,299,825 | + | BWI76_RS20525 | 0.46 | -0.4 | |
4,299,979 | - | BWI76_RS20525 | 0.62 | -2.0 | |
4,300,019 | + | BWI76_RS20525 | 0.66 | -0.8 | |
4,300,207 | + | BWI76_RS20525 | 0.85 | +0.2 | |
4,300,215 | - | BWI76_RS20525 | 0.85 | +0.1 | |
4,300,215 | - | BWI76_RS20525 | 0.85 | +1.2 | |
4,300,241 | + | BWI76_RS20525 | 0.88 | -1.1 | |
4,300,275 | + | -0.3 | |||
4,300,417 | - | -1.4 | |||
4,300,434 | + | -2.4 | |||
4,300,447 | + | +0.6 | |||
4,300,488 | - | +1.4 | |||
4,300,563 | + | BWI76_RS20530 | 0.20 | -3.1 | |
4,300,704 | - | BWI76_RS20530 | 0.59 | +0.1 | |
4,300,726 | + | BWI76_RS20530 | 0.66 | -1.1 | |
4,301,402 | + | BWI76_RS20535 | 0.41 | +1.4 |
Or see this region's nucleotide sequence