Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20125

Experiment: KLEB20 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB20 MOI 1
4,215,402	+		BWI76_RS20120	0.23	+0.7
4,215,414	-		BWI76_RS20120	0.25	-0.5
4,215,479	+		BWI76_RS20120	0.38	+0.5
4,215,487	-		BWI76_RS20120	0.39	+0.3
4,215,668	+		BWI76_RS20120	0.73	-0.1
4,215,676	-		BWI76_RS20120	0.75	-1.6
4,215,730	-		BWI76_RS20120	0.85	-2.3
4,215,730	-		BWI76_RS20120	0.85	+0.8
4,215,734	+		BWI76_RS20120	0.86	+0.5
4,215,745	-		BWI76_RS20120	0.88	-1.0
4,215,745	-		BWI76_RS20120	0.88	+0.3
4,215,745	-		BWI76_RS20120	0.88	+1.3
4,215,747	+		BWI76_RS20120	0.88	-3.0
4,215,747	+		BWI76_RS20120	0.88	+0.1
4,215,747	+		BWI76_RS20120	0.88	+2.0
4,215,752	+		BWI76_RS20120	0.89	-1.2
4,215,752	+		BWI76_RS20120	0.89	-1.0
4,215,752	+		BWI76_RS20120	0.89	-2.8
4,215,752	+		BWI76_RS20120	0.89	-1.0
4,215,752	+		BWI76_RS20120	0.89	-2.4
4,215,752	+		BWI76_RS20120	0.89	-1.4
4,215,752	+		BWI76_RS20120	0.89	-2.4
4,215,760	-				+0.2
4,215,760	-				+0.4
4,215,760	-				-1.0
4,215,760	-				+0.3
4,215,760	-				-0.0
4,215,760	-				-0.6
4,215,760	-				+1.0
4,215,760	-				-2.3
4,215,760	-				-1.4
4,215,760	-				+1.1
4,215,772	+				+2.2
4,215,780	-				+0.5
4,215,780	-				-0.0
4,215,780	-				-0.2
4,215,780	-				+1.5
4,215,780	-				-1.2
4,215,780	-				-2.3
4,215,780	-				-0.9
4,215,780	-				+0.0
4,215,788	-				-2.0
4,215,818	+				+0.4
4,215,818	+				+0.3
4,215,826	-				-1.1
4,215,848	+				-0.4
4,215,848	+				-1.5
4,215,848	+				+0.3
4,215,848	+				-1.0
4,215,848	+				-2.3
4,215,856	-				+0.0
4,215,856	-				-0.1
4,215,856	-				+0.4
4,215,856	-				+1.1
4,215,856	-				-0.8
4,215,856	-				+0.9
4,215,856	-				+0.4
4,215,885	+				-1.7
4,215,952	+				+0.2
4,216,028	-				-0.6
4,216,073	-				+0.4
4,216,074	-				-0.4
4,216,336	+		BWI76_RS20125	0.19	-0.5
4,216,357	-		BWI76_RS20125	0.22	+0.4
4,216,449	+		BWI76_RS20125	0.39	-0.2
4,216,529	+		BWI76_RS20125	0.54	-0.6
4,216,538	+		BWI76_RS20125	0.55	-1.7
4,216,539	-		BWI76_RS20125	0.55	-2.8
4,216,545	-		BWI76_RS20125	0.57	+0.1
4,216,546	-		BWI76_RS20125	0.57	-1.2
4,216,666	-		BWI76_RS20125	0.78	-1.0
4,216,719	+		BWI76_RS20125	0.88	-3.4
4,216,719	+		BWI76_RS20125	0.88	-1.8
4,216,723	-		BWI76_RS20125	0.89	+0.4
4,216,727	-		BWI76_RS20125	0.89	+0.1
4,216,728	-		BWI76_RS20125	0.90	-2.4
4,216,740	+				-0.0
4,216,741	+				-0.2
4,216,798	+				+2.1
4,216,798	+				-0.7
4,216,806	-				-1.7
4,216,808	+				+0.5
4,216,811	-				+1.0
4,216,958	-				+0.4
4,216,983	-				-0.4
4,216,990	+				+0.6
4,216,993	-				+0.1
4,216,993	-				-0.3
4,217,006	-				-0.7
4,217,010	+				-1.5
4,217,010	+				-1.4
4,217,015	+				+2.5
4,217,015	+				-0.4
4,217,020	+				-1.0
4,217,028	-				+3.1
4,217,042	+				+0.3
4,217,046	+				-0.2
4,217,050	-				-0.0
4,217,050	-				+0.9
4,217,090	+				-0.0
4,217,145	+		BWI76_RS20130	0.11	-1.0
4,217,145	+		BWI76_RS20130	0.11	-1.5
4,217,160	-		BWI76_RS20130	0.12	-0.1
4,217,427	+		BWI76_RS20130	0.30	-2.8
4,217,435	-		BWI76_RS20130	0.31	-0.7