Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19590
Experiment: KLEB20 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB20 MOI 1 |
---|---|---|---|---|---|
remove | |||||
4,094,553 | - | BWI76_RS19585 | 0.18 | -1.6 | |
4,094,733 | - | BWI76_RS19585 | 0.35 | -1.7 | |
4,094,905 | - | BWI76_RS19585 | 0.51 | +1.1 | |
4,095,479 | + | +0.1 | |||
4,095,500 | + | -3.2 | |||
4,095,641 | - | BWI76_RS19590 | 0.16 | +2.3 | |
4,095,812 | - | BWI76_RS19590 | 0.29 | +1.2 | |
4,096,395 | - | BWI76_RS19590 | 0.72 | +0.7 | |
4,096,409 | + | BWI76_RS19590 | 0.73 | +0.3 | |
4,096,417 | - | BWI76_RS19590 | 0.73 | -0.3 | |
4,096,804 | - | -0.6 | |||
4,097,321 | + | BWI76_RS19595 | 0.45 | +0.1 | |
4,097,414 | - | BWI76_RS19595 | 0.55 | +0.9 | |
4,097,477 | - | BWI76_RS19595 | 0.62 | -3.5 | |
4,097,555 | + | BWI76_RS19595 | 0.71 | -1.8 | |
4,097,672 | + | BWI76_RS19595 | 0.84 | -0.5 | |
4,097,672 | + | BWI76_RS19595 | 0.84 | -1.2 | |
4,097,672 | + | BWI76_RS19595 | 0.84 | -0.5 | |
4,097,672 | + | BWI76_RS19595 | 0.84 | -0.2 | |
4,097,680 | - | BWI76_RS19595 | 0.84 | +5.0 | |
4,097,690 | - | BWI76_RS19595 | 0.86 | -0.8 | |
4,097,726 | + | BWI76_RS19595 | 0.89 | +2.3 | |
4,097,770 | + | +0.5 |
Or see this region's nucleotide sequence