Experiment: KLEB20 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18675 and BWI76_RS18680 are separated by 109 nucleotides BWI76_RS18680 and BWI76_RS18685 are separated by 38 nucleotides
BWI76_RS18675: BWI76_RS18675 - fimbrial protein, at 3,871,230 to 3,872,135
_RS18675
BWI76_RS18680: BWI76_RS18680 - EAL domain-containing protein, at 3,872,245 to 3,873,597
_RS18680
BWI76_RS18685: BWI76_RS18685 - 6-phospho-alpha-glucosidase, at 3,873,636 to 3,874,964
_RS18685
Position (kb)
3872
3873
3874 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3871.467 kb on - strand, within BWI76_RS18675 at 3871.598 kb on + strand, within BWI76_RS18675 at 3872.041 kb on + strand, within BWI76_RS18675 at 3872.121 kb on - strand at 3872.330 kb on - strand at 3872.465 kb on - strand, within BWI76_RS18680 at 3872.624 kb on - strand, within BWI76_RS18680 at 3872.914 kb on - strand, within BWI76_RS18680 at 3872.991 kb on - strand, within BWI76_RS18680 at 3873.036 kb on - strand, within BWI76_RS18680 at 3873.397 kb on + strand, within BWI76_RS18680 at 3873.399 kb on - strand, within BWI76_RS18680 at 3873.644 kb on + strand at 3873.862 kb on - strand, within BWI76_RS18685 at 3874.140 kb on + strand, within BWI76_RS18685 at 3874.147 kb on - strand, within BWI76_RS18685 at 3874.147 kb on - strand, within BWI76_RS18685 at 3874.174 kb on + strand, within BWI76_RS18685 at 3874.174 kb on + strand, within BWI76_RS18685 at 3874.182 kb on - strand, within BWI76_RS18685 at 3874.182 kb on - strand, within BWI76_RS18685 at 3874.188 kb on + strand, within BWI76_RS18685 at 3874.193 kb on - strand, within BWI76_RS18685 at 3874.199 kb on + strand, within BWI76_RS18685 at 3874.210 kb on + strand, within BWI76_RS18685 at 3874.283 kb on - strand, within BWI76_RS18685 at 3874.283 kb on - strand, within BWI76_RS18685 at 3874.283 kb on - strand, within BWI76_RS18685 at 3874.284 kb on - strand, within BWI76_RS18685 at 3874.294 kb on - strand, within BWI76_RS18685 at 3874.344 kb on - strand, within BWI76_RS18685 at 3874.497 kb on + strand, within BWI76_RS18685 at 3874.520 kb on + strand, within BWI76_RS18685 at 3874.528 kb on - strand, within BWI76_RS18685 at 3874.577 kb on + strand, within BWI76_RS18685 at 3874.577 kb on + strand, within BWI76_RS18685
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB20 MOI 1 remove 3,871,467 - BWI76_RS18675 0.26 -2.2 3,871,598 + BWI76_RS18675 0.41 -0.4 3,872,041 + BWI76_RS18675 0.90 +0.1 3,872,121 - +0.4 3,872,330 - -2.1 3,872,465 - BWI76_RS18680 0.16 -1.1 3,872,624 - BWI76_RS18680 0.28 -0.7 3,872,914 - BWI76_RS18680 0.49 +0.1 3,872,991 - BWI76_RS18680 0.55 -1.4 3,873,036 - BWI76_RS18680 0.58 -1.2 3,873,397 + BWI76_RS18680 0.85 +0.3 3,873,399 - BWI76_RS18680 0.85 -1.6 3,873,644 + -1.0 3,873,862 - BWI76_RS18685 0.17 -0.7 3,874,140 + BWI76_RS18685 0.38 -2.0 3,874,147 - BWI76_RS18685 0.38 -0.7 3,874,147 - BWI76_RS18685 0.38 -0.3 3,874,174 + BWI76_RS18685 0.40 -2.5 3,874,174 + BWI76_RS18685 0.40 -1.5 3,874,182 - BWI76_RS18685 0.41 -0.1 3,874,182 - BWI76_RS18685 0.41 +0.9 3,874,188 + BWI76_RS18685 0.42 +0.1 3,874,193 - BWI76_RS18685 0.42 -1.3 3,874,199 + BWI76_RS18685 0.42 +1.0 3,874,210 + BWI76_RS18685 0.43 -1.4 3,874,283 - BWI76_RS18685 0.49 -2.1 3,874,283 - BWI76_RS18685 0.49 +0.1 3,874,283 - BWI76_RS18685 0.49 +1.0 3,874,284 - BWI76_RS18685 0.49 +2.2 3,874,294 - BWI76_RS18685 0.50 +0.2 3,874,344 - BWI76_RS18685 0.53 -0.3 3,874,497 + BWI76_RS18685 0.65 -2.5 3,874,520 + BWI76_RS18685 0.67 +0.4 3,874,528 - BWI76_RS18685 0.67 +0.2 3,874,577 + BWI76_RS18685 0.71 +0.2 3,874,577 + BWI76_RS18685 0.71 +2.2
Or see this region's nucleotide sequence