Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18345

Experiment: KLEB20 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB20 MOI 1
3,807,902	-		BWI76_RS18335	0.76	+0.2
3,807,922	-		BWI76_RS18335	0.79	+2.8
3,807,933	+		BWI76_RS18335	0.80	+0.3
3,807,963	-		BWI76_RS18335	0.85	+1.3
3,807,966	-		BWI76_RS18335	0.85	+2.2
3,807,971	-		BWI76_RS18335	0.86	+1.6
3,807,977	+		BWI76_RS18335	0.87	+2.9
3,807,977	+		BWI76_RS18335	0.87	+3.4
3,807,985	-		BWI76_RS18335	0.88	+0.7
3,807,986	+		BWI76_RS18335	0.88	-2.5
3,808,008	+				-0.4
3,808,016	-				+1.5
3,808,016	-				+1.4
3,808,018	-				+1.4
3,808,035	-				+0.6
3,808,045	+				+1.0
3,808,056	+				-1.1
3,808,056	+				+1.6
3,808,064	-				+2.3
3,808,064	-				+1.1
3,808,084	+				+0.2
3,808,093	+				+1.5
3,808,101	-				+1.2
3,808,200	-				-0.4
3,808,200	-				-3.0
3,808,219	-				-3.0
3,808,220	+				-1.1
3,808,220	+				+2.6
3,808,220	+				+0.5
3,808,225	+				-2.1
3,808,228	-				+0.0
3,808,228	-				-2.2
3,808,228	-				-0.6
3,808,228	-				-3.5
3,808,228	-				-1.4
3,808,228	-				-2.3
3,808,233	-				-0.7
3,808,276	-				-2.2
3,808,276	-				-2.8
3,808,283	-				-0.4
3,808,283	-				+1.0
3,808,283	-				-1.1
3,808,292	+				-3.2
3,808,295	-				-1.6
3,808,300	-				-0.6
3,808,300	-				-2.0
3,808,300	-				-3.1
3,808,302	-				-0.7
3,808,338	-				+0.1
3,808,360	+				-2.5
3,808,361	+				-0.1
3,808,361	+				-1.0
3,808,361	+				-1.1
3,808,361	+				-1.3
3,808,361	+				+0.6
3,808,369	-				+0.3
3,808,369	-				+2.2
3,808,369	-				-1.7
3,808,369	-				+0.5
3,808,369	-				-0.7
3,808,369	-				-0.6
3,808,369	-				-2.3
3,808,369	-				-0.6
3,808,380	+				-0.3
3,808,388	-				+0.1
3,808,407	+				-0.1
3,808,415	-				-0.1
3,808,458	+				+0.5
3,808,458	+				+1.8
3,808,458	+				+0.3
3,808,458	+				+0.2
3,808,458	+				-1.7
3,808,458	+				+0.4
3,808,458	+				+0.0
3,808,458	+				+0.6
3,808,458	+				+1.2
3,808,458	+				-0.1
3,808,458	+				-0.1
3,808,458	+				-1.4
3,808,458	+				-1.0
3,808,458	+				+0.6
3,808,458	+				-0.1
3,808,460	+				-0.1
3,808,463	+				+0.4
3,808,466	-				-0.8
3,808,466	-				-0.4
3,808,466	-				-0.2
3,808,466	-				-0.6
3,808,466	-				-3.0
3,808,466	-				-0.3
3,808,466	-				-1.0
3,808,468	-				-2.6
3,808,471	-				+0.2
3,808,486	-				-1.9
3,808,494	+				+0.4
3,808,514	-				+0.2
3,808,603	+		BWI76_RS18340	0.35	+0.7
3,808,605	-		BWI76_RS18340	0.36	-3.1
3,808,616	+		BWI76_RS18340	0.41	-0.1
3,808,616	+		BWI76_RS18340	0.41	+0.8
3,808,616	+		BWI76_RS18340	0.41	-0.4
3,808,618	+		BWI76_RS18340	0.42	+0.2
3,808,618	+		BWI76_RS18340	0.42	+1.7
3,808,623	+		BWI76_RS18340	0.44	+0.6
3,808,623	+		BWI76_RS18340	0.44	-0.7
3,808,623	+		BWI76_RS18340	0.44	+0.6
3,808,623	+		BWI76_RS18340	0.44	+2.5
3,808,624	-		BWI76_RS18340	0.44	-0.5
3,808,624	-		BWI76_RS18340	0.44	-1.5
3,808,624	-		BWI76_RS18340	0.44	+0.5
3,808,624	-		BWI76_RS18340	0.44	+0.0
3,808,628	+		BWI76_RS18340	0.46	-1.1
3,808,628	+		BWI76_RS18340	0.46	-2.2
3,808,628	+		BWI76_RS18340	0.46	-2.9
3,808,628	+		BWI76_RS18340	0.46	-2.0
3,808,628	+		BWI76_RS18340	0.46	-1.3
3,808,628	+		BWI76_RS18340	0.46	-0.3
3,808,631	-		BWI76_RS18340	0.48	+0.9
3,808,631	-		BWI76_RS18340	0.48	-2.9
3,808,632	+		BWI76_RS18340	0.48	+0.0
3,808,632	+		BWI76_RS18340	0.48	+0.6
3,808,632	+		BWI76_RS18340	0.48	-2.0
3,808,632	+		BWI76_RS18340	0.48	-0.7
3,808,632	+		BWI76_RS18340	0.48	+0.6
3,808,636	-		BWI76_RS18340	0.50	-0.8
3,808,636	-		BWI76_RS18340	0.50	-1.4
3,808,636	-		BWI76_RS18340	0.50	-0.7
3,808,636	-		BWI76_RS18340	0.50	+1.0
3,808,640	-		BWI76_RS18340	0.52	+0.0
3,808,640	-		BWI76_RS18340	0.52	+1.5
3,808,640	-		BWI76_RS18340	0.52	-3.0
3,808,640	-		BWI76_RS18340	0.52	+0.6
3,808,640	-		BWI76_RS18340	0.52	+1.4
3,808,676	+		BWI76_RS18340	0.68	-0.9
3,808,676	+		BWI76_RS18340	0.68	+0.2
3,808,676	+		BWI76_RS18340	0.68	-0.2
3,808,676	+		BWI76_RS18340	0.68	+0.9
3,808,676	+		BWI76_RS18340	0.68	+0.6
3,808,676	+		BWI76_RS18340	0.68	-0.2
3,808,676	+		BWI76_RS18340	0.68	+0.0
3,808,676	+		BWI76_RS18340	0.68	-1.5
3,808,676	+		BWI76_RS18340	0.68	-2.3
3,808,676	+		BWI76_RS18340	0.68	-1.4
3,808,676	+		BWI76_RS18340	0.68	-1.0
3,808,676	+		BWI76_RS18340	0.68	-0.4
3,808,676	+		BWI76_RS18340	0.68	-0.1
3,808,678	+		BWI76_RS18340	0.68	-0.9
3,808,688	+		BWI76_RS18340	0.73	-0.3
3,808,688	+		BWI76_RS18340	0.73	+0.1
3,808,688	+		BWI76_RS18340	0.73	+0.8
3,808,688	+		BWI76_RS18340	0.73	+0.2
3,808,688	+		BWI76_RS18340	0.73	-1.3
3,808,688	+		BWI76_RS18340	0.73	+0.5
3,808,688	+		BWI76_RS18340	0.73	-0.4
3,808,688	+		BWI76_RS18340	0.73	-0.6
3,808,688	+		BWI76_RS18340	0.73	-0.9
3,808,696	-				-0.4
3,808,696	-		BWI76_RS18340	0.76	-0.6
3,808,698	+		BWI76_RS18340	0.77	+0.1
3,808,698	+		BWI76_RS18340	0.77	-0.1
3,808,701	+		BWI76_RS18340	0.79	-0.5
3,808,706	+		BWI76_RS18340	0.81	-0.2
3,808,714	+		BWI76_RS18340	0.84	+0.6
3,808,733	+				-1.3
3,808,772	-				-1.0
3,808,776	+				+0.1
3,808,782	+				-1.0
3,808,782	+				-2.8
3,808,904	-		BWI76_RS18345	0.12	+6.1
3,808,957	+		BWI76_RS18345	0.20	+4.5
3,808,960	-		BWI76_RS18345	0.20	+8.0
3,809,027	-		BWI76_RS18345	0.29	-0.3
3,809,045	+		BWI76_RS18345	0.32	+6.8
3,809,046	+		BWI76_RS18345	0.32	+8.2
3,809,063	-		BWI76_RS18345	0.34	+5.2
3,809,063	-		BWI76_RS18345	0.34	+5.6
3,809,100	+		BWI76_RS18345	0.39	+6.4
3,809,109	+		BWI76_RS18345	0.41	+4.3
3,809,110	+		BWI76_RS18345	0.41	+3.0
3,809,115	+		BWI76_RS18345	0.41	+6.6
3,809,156	+		BWI76_RS18345	0.47	+5.6
3,809,164	-		BWI76_RS18345	0.48	+6.1
3,809,164	-		BWI76_RS18345	0.48	+6.0
3,809,164	-		BWI76_RS18345	0.48	+6.2
3,809,164	-		BWI76_RS18345	0.48	+4.1
3,809,166	+		BWI76_RS18345	0.48	+5.2
3,809,174	-		BWI76_RS18345	0.50	+5.7
3,809,174	-		BWI76_RS18345	0.50	+2.5
3,809,174	-		BWI76_RS18345	0.50	+6.8
3,809,174	-		BWI76_RS18345	0.50	+5.7
3,809,174	-		BWI76_RS18345	0.50	+6.0
3,809,176	-		BWI76_RS18345	0.50	+6.3
3,809,178	+		BWI76_RS18345	0.50	+5.6
3,809,292	+		BWI76_RS18345	0.66	+6.2
3,809,292	+		BWI76_RS18345	0.66	+6.5
3,809,295	-		BWI76_RS18345	0.66	+7.0
3,809,300	-		BWI76_RS18345	0.67	+6.1
3,809,300	-		BWI76_RS18345	0.67	+6.5
3,809,300	-		BWI76_RS18345	0.67	+5.3
3,809,336	+		BWI76_RS18345	0.72	+5.6
3,809,336	+		BWI76_RS18345	0.72	+6.2
3,809,344	-		BWI76_RS18345	0.73	+6.8
3,809,344	-		BWI76_RS18345	0.73	+6.2
3,809,344	-		BWI76_RS18345	0.73	+6.0
3,809,344	-		BWI76_RS18345	0.73	+6.1
3,809,344	-		BWI76_RS18345	0.73	+7.2
3,809,344	-		BWI76_RS18345	0.73	+5.9
3,809,344	-		BWI76_RS18345	0.73	+4.7
3,809,349	-		BWI76_RS18345	0.74	+7.4
3,809,354	+		BWI76_RS18345	0.74	+6.2
3,809,372	-		BWI76_RS18345	0.77	+5.5
3,809,372	-		BWI76_RS18345	0.77	+5.9
3,809,377	-		BWI76_RS18345	0.78	+6.6
3,809,377	-		BWI76_RS18345	0.78	+6.1
3,809,387	+		BWI76_RS18345	0.79	-0.4
3,809,397	+		BWI76_RS18345	0.80	+6.8
3,809,405	-		BWI76_RS18345	0.81	+6.0
3,809,405	-		BWI76_RS18345	0.81	+6.5
3,809,405	-		BWI76_RS18345	0.81	+5.6
3,809,417	-		BWI76_RS18345	0.83	+6.5
3,809,469	+				+7.1
3,809,477	-				+6.0
3,809,541	-				-1.0
3,809,548	+				+5.8
3,809,553	-				+3.1
3,809,556	-				+2.6
3,809,556	-				+5.6
3,809,556	-				+5.5
3,809,695	-				+2.3
3,809,698	+				+2.0
3,809,698	+				+2.1
3,809,698	+				+4.1
3,809,706	-				-1.4
3,809,723	+				+1.2
3,809,723	+				+2.3
3,809,723	+				+1.0
3,809,723	+				+0.7
3,809,723	-				-0.3
3,809,731	-				+1.1
3,809,748	-				+1.1
3,809,791	+				+0.8
3,809,799	-				+0.2
3,809,806	+				+2.8
3,809,819	-				+0.5
3,809,861	+				+0.3
3,809,866	+				+0.2
3,810,023	+		BWI76_RS18350	0.26	+1.2
3,810,198	+		BWI76_RS18350	0.49	+0.7
3,810,276	+		BWI76_RS18350	0.60	+0.6
3,810,324	-		BWI76_RS18350	0.66	+1.3
3,810,357	+		BWI76_RS18350	0.70	+0.9
3,810,365	-		BWI76_RS18350	0.71	+0.7
3,810,437	-		BWI76_RS18350	0.81	+1.2
3,810,518	-				+1.4