Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15635
Experiment: KLEB20 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB20 MOI 1 |
---|---|---|---|---|---|
remove | |||||
3,266,964 | - | BWI76_RS15630 | 0.17 | -1.7 | |
3,267,066 | + | +2.8 | |||
3,267,237 | - | BWI76_RS15630 | 0.42 | -0.3 | |
3,267,495 | - | BWI76_RS15630 | 0.66 | -0.4 | |
3,267,965 | - | BWI76_RS15635 | 0.20 | +0.9 | |
3,267,965 | - | BWI76_RS15635 | 0.20 | -0.8 | |
3,268,068 | - | BWI76_RS15635 | 0.43 | -1.6 | |
3,268,143 | - | BWI76_RS15635 | 0.60 | -1.2 | |
3,268,187 | + | BWI76_RS15635 | 0.70 | -1.6 | |
3,268,271 | + | BWI76_RS15635 | 0.89 | +1.2 | |
3,268,279 | - | -2.1 | |||
3,268,771 | + | BWI76_RS15640 | 0.35 | -0.9 | |
3,268,836 | - | BWI76_RS15640 | 0.40 | -0.3 | |
3,269,021 | + | BWI76_RS15640 | 0.54 | -0.7 | |
3,269,054 | - | BWI76_RS15640 | 0.57 | +1.0 | |
3,269,192 | + | BWI76_RS15640 | 0.68 | +1.1 |
Or see this region's nucleotide sequence