Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15335
Experiment: KLEB20 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB20 MOI 1 |
---|---|---|---|---|---|
remove | |||||
3,209,976 | + | BWI76_RS15330 | 0.12 | +0.9 | |
3,209,976 | + | BWI76_RS15330 | 0.12 | +0.4 | |
3,209,979 | - | BWI76_RS15330 | 0.13 | +0.3 | |
3,210,145 | + | BWI76_RS15330 | 0.28 | +1.2 | |
3,210,155 | + | BWI76_RS15330 | 0.29 | +0.6 | |
3,210,155 | + | +0.8 | |||
3,210,415 | + | BWI76_RS15330 | 0.53 | -2.8 | |
3,210,925 | - | -0.9 | |||
3,211,111 | + | -0.7 | |||
3,211,144 | + | BWI76_RS15335 | 0.14 | +1.0 | |
3,211,850 | + | BWI76_RS15335 | 0.59 | +0.5 | |
3,211,885 | - | BWI76_RS15335 | 0.61 | +0.4 | |
3,212,101 | + | BWI76_RS15335 | 0.75 | +1.1 | |
3,212,534 | + | +1.6 | |||
3,212,758 | + | BWI76_RS15340 | 0.14 | +0.1 | |
3,213,004 | - | BWI76_RS15340 | 0.34 | -0.8 | |
3,213,110 | - | BWI76_RS15340 | 0.42 | +0.2 | |
3,213,476 | - | BWI76_RS15340 | 0.71 | +1.2 | |
3,213,488 | - | BWI76_RS15340 | 0.72 | -0.1 |
Or see this region's nucleotide sequence