Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14215
Experiment: KLEB20 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB20 MOI 1 |
---|---|---|---|---|---|
remove | |||||
2,974,902 | + | BWI76_RS14210 | 0.25 | +0.2 | |
2,974,902 | + | BWI76_RS14210 | 0.25 | -0.5 | |
2,974,904 | - | BWI76_RS14210 | 0.25 | -0.5 | |
2,974,957 | - | BWI76_RS14210 | 0.31 | -1.7 | |
2,974,998 | + | BWI76_RS14210 | 0.35 | +0.9 | |
2,975,194 | + | BWI76_RS14210 | 0.55 | -0.8 | |
2,975,275 | - | BWI76_RS14210 | 0.64 | +0.0 | |
2,975,500 | + | BWI76_RS14210 | 0.87 | -0.7 | |
2,975,969 | + | BWI76_RS14215 | 0.39 | -0.1 | |
2,975,970 | - | BWI76_RS14215 | 0.39 | -1.7 | |
2,975,998 | - | BWI76_RS14215 | 0.49 | -1.0 | |
2,976,025 | - | BWI76_RS14215 | 0.59 | +1.0 | |
2,976,097 | + | BWI76_RS14215 | 0.84 | -1.1 | |
2,976,097 | + | BWI76_RS14215 | 0.84 | -0.9 | |
2,976,110 | + | BWI76_RS14215 | 0.89 | -0.8 | |
2,976,123 | + | -1.7 | |||
2,976,133 | - | -1.5 | |||
2,976,672 | + | BWI76_RS14225 | 0.17 | -1.5 | |
2,976,680 | - | BWI76_RS14225 | 0.18 | -0.2 |
Or see this region's nucleotide sequence