Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13330

Experiment: KLEB20 MOI 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS13325 and BWI76_RS13330 are separated by 2 nucleotidesBWI76_RS13330 and BWI76_RS13335 overlap by 4 nucleotides BWI76_RS13325: BWI76_RS13325 - dicarboxylate transporter/tellurite-resistance protein TehA, at 2,779,061 to 2,780,059 _RS13325 BWI76_RS13330: BWI76_RS13330 - tellurite resistance methyltransferase TehB, at 2,780,062 to 2,780,658 _RS13330 BWI76_RS13335: BWI76_RS13335 - peptidase T, at 2,780,655 to 2,781,884 _RS13335 Position (kb) 2780 2781Strain fitness (log2 ratio) -2 -1 0 1 2at 2779.143 kb on + strandat 2779.202 kb on + strand, within BWI76_RS13325at 2779.278 kb on + strand, within BWI76_RS13325at 2779.286 kb on - strand, within BWI76_RS13325at 2779.346 kb on - strand, within BWI76_RS13325at 2779.605 kb on + strand, within BWI76_RS13325at 2780.143 kb on - strand, within BWI76_RS13330at 2780.843 kb on + strand, within BWI76_RS13335at 2780.999 kb on - strand, within BWI76_RS13335at 2781.008 kb on + strand, within BWI76_RS13335at 2781.340 kb on - strand, within BWI76_RS13335at 2781.475 kb on - strand, within BWI76_RS13335at 2781.532 kb on - strand, within BWI76_RS13335at 2781.578 kb on - strand, within BWI76_RS13335at 2781.629 kb on - strand, within BWI76_RS13335

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Per-strain Table

Position Strand Gene LocusTag Fraction KLEB20 MOI 1
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2,779,143 + -0.2
2,779,202 + BWI76_RS13325 0.14 +0.0
2,779,278 + BWI76_RS13325 0.22 -0.3
2,779,286 - BWI76_RS13325 0.23 -2.1
2,779,346 - BWI76_RS13325 0.29 +2.1
2,779,605 + BWI76_RS13325 0.54 -1.1
2,780,143 - BWI76_RS13330 0.14 -1.3
2,780,843 + BWI76_RS13335 0.15 +2.1
2,780,999 - BWI76_RS13335 0.28 -0.1
2,781,008 + BWI76_RS13335 0.29 -0.3
2,781,340 - BWI76_RS13335 0.56 +0.4
2,781,475 - BWI76_RS13335 0.67 +1.1
2,781,532 - BWI76_RS13335 0.71 -0.4
2,781,578 - BWI76_RS13335 0.75 +1.0
2,781,629 - BWI76_RS13335 0.79 -1.2

Or see this region's nucleotide sequence