Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11490
Experiment: KLEB20 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB20 MOI 1 |
---|---|---|---|---|---|
remove | |||||
2,418,905 | + | BWI76_RS11485 | 0.80 | -2.5 | |
2,418,905 | + | BWI76_RS11485 | 0.80 | +1.0 | |
2,418,921 | - | BWI76_RS11485 | 0.81 | +1.6 | |
2,419,179 | + | -0.3 | |||
2,419,316 | + | -2.1 | |||
2,419,324 | - | -0.5 | |||
2,419,375 | + | -1.5 | |||
2,419,400 | - | -2.1 | |||
2,419,400 | - | -0.7 | |||
2,419,400 | - | -0.8 | |||
2,419,582 | + | +0.5 | |||
2,419,667 | + | -0.3 | |||
2,419,709 | - | -1.0 | |||
2,419,760 | + | -1.2 | |||
2,419,792 | + | BWI76_RS11490 | 0.11 | -2.7 | |
2,420,053 | + | BWI76_RS11490 | 0.46 | -0.4 | |
2,420,199 | + | BWI76_RS11490 | 0.65 | -0.9 | |
2,420,228 | + | BWI76_RS11490 | 0.69 | -2.4 | |
2,420,306 | + | BWI76_RS11490 | 0.79 | -4.2 | |
2,420,376 | - | BWI76_RS11490 | 0.89 | -1.1 | |
2,420,444 | + | +0.4 | |||
2,420,452 | - | -2.4 | |||
2,421,080 | - | BWI76_RS11495 | 0.62 | -1.2 | |
2,421,333 | + | -0.3 |
Or see this region's nucleotide sequence