Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11490

Experiment: KLEB20 MOI 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11485 and BWI76_RS11490 are separated by 426 nucleotidesBWI76_RS11490 and BWI76_RS11495 are separated by 92 nucleotides BWI76_RS11485: BWI76_RS11485 - serine protein kinase PrkA, at 2,417,352 to 2,419,286 _RS11485 BWI76_RS11490: BWI76_RS11490 - MltA-interacting protein MipA, at 2,419,713 to 2,420,459 _RS11490 BWI76_RS11495: BWI76_RS11495 - hypothetical protein, at 2,420,552 to 2,421,406 _RS11495 Position (kb) 2419 2420 2421Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 2418.905 kb on + strand, within BWI76_RS11485at 2418.905 kb on + strand, within BWI76_RS11485at 2418.921 kb on - strand, within BWI76_RS11485at 2419.179 kb on + strandat 2419.316 kb on + strandat 2419.324 kb on - strandat 2419.375 kb on + strandat 2419.400 kb on - strandat 2419.400 kb on - strandat 2419.400 kb on - strandat 2419.582 kb on + strandat 2419.667 kb on + strandat 2419.709 kb on - strandat 2419.760 kb on + strandat 2419.792 kb on + strand, within BWI76_RS11490at 2420.053 kb on + strand, within BWI76_RS11490at 2420.199 kb on + strand, within BWI76_RS11490at 2420.228 kb on + strand, within BWI76_RS11490at 2420.306 kb on + strand, within BWI76_RS11490at 2420.376 kb on - strand, within BWI76_RS11490at 2420.444 kb on + strandat 2420.452 kb on - strandat 2421.080 kb on - strand, within BWI76_RS11495at 2421.333 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction KLEB20 MOI 1
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2,418,905 + BWI76_RS11485 0.80 -2.5
2,418,905 + BWI76_RS11485 0.80 +1.0
2,418,921 - BWI76_RS11485 0.81 +1.6
2,419,179 + -0.3
2,419,316 + -2.1
2,419,324 - -0.5
2,419,375 + -1.5
2,419,400 - -2.1
2,419,400 - -0.7
2,419,400 - -0.8
2,419,582 + +0.5
2,419,667 + -0.3
2,419,709 - -1.0
2,419,760 + -1.2
2,419,792 + BWI76_RS11490 0.11 -2.7
2,420,053 + BWI76_RS11490 0.46 -0.4
2,420,199 + BWI76_RS11490 0.65 -0.9
2,420,228 + BWI76_RS11490 0.69 -2.4
2,420,306 + BWI76_RS11490 0.79 -4.2
2,420,376 - BWI76_RS11490 0.89 -1.1
2,420,444 + +0.4
2,420,452 - -2.4
2,421,080 - BWI76_RS11495 0.62 -1.2
2,421,333 + -0.3

Or see this region's nucleotide sequence