Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10835
Experiment: KLEB20 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB20 MOI 1 |
---|---|---|---|---|---|
remove | |||||
2,289,081 | - | BWI76_RS10830 | 0.13 | -0.4 | |
2,289,090 | + | BWI76_RS10830 | 0.14 | -0.3 | |
2,289,189 | + | BWI76_RS10830 | 0.23 | +0.1 | |
2,289,234 | - | BWI76_RS10830 | 0.27 | +1.2 | |
2,289,537 | - | BWI76_RS10830 | 0.56 | +0.9 | |
2,289,668 | + | BWI76_RS10830 | 0.68 | -0.2 | |
2,289,708 | - | BWI76_RS10830 | 0.72 | +1.2 | |
2,289,997 | + | +0.5 | |||
2,290,057 | + | -0.5 | |||
2,290,065 | - | +1.1 | |||
2,290,082 | - | -1.2 | |||
2,290,159 | + | BWI76_RS10835 | 0.35 | -1.9 | |
2,290,566 | + | +0.5 | |||
2,290,618 | - | BWI76_RS10840 | 0.14 | +0.2 | |
2,290,642 | + | BWI76_RS10840 | 0.17 | +0.0 | |
2,290,642 | + | BWI76_RS10840 | 0.17 | +0.3 | |
2,290,652 | + | BWI76_RS10840 | 0.19 | -0.2 | |
2,290,846 | + | BWI76_RS10840 | 0.43 | +0.5 | |
2,291,271 | - | +0.7 |
Or see this region's nucleotide sequence