Experiment: KLEB17 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06730 and BWI76_RS06735 are separated by 111 nucleotides BWI76_RS06735 and BWI76_RS06740 overlap by 1 nucleotides BWI76_RS06740 and BWI76_RS06745 overlap by 4 nucleotides BWI76_RS06745 and BWI76_RS06750 are separated by 100 nucleotides
BWI76_RS06730: BWI76_RS06730 - lac repressor, at 1,412,617 to 1,413,690
_RS06730
BWI76_RS06735: BWI76_RS06735 - 50S ribosomal protein L31, at 1,413,802 to 1,414,065
_RS06735
BWI76_RS06740: BWI76_RS06740 - 50S ribosomal protein L36, at 1,414,065 to 1,414,205
_RS06740
BWI76_RS06745: BWI76_RS06745 - N-acetyltransferase GCN5, at 1,414,202 to 1,414,900
_RS06745
BWI76_RS06750: BWI76_RS06750 - GntR family transcriptional regulator with, at 1,415,001 to 1,416,455
_RS06750
Position (kb) 1414
1415 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1413.248 kb on + strand, within BWI76_RS06730 at 1413.536 kb on - strand, within BWI76_RS06730 at 1413.592 kb on + strand at 1413.622 kb on + strand at 1413.657 kb on + strand at 1413.657 kb on + strand at 1413.665 kb on - strand at 1413.907 kb on + strand, within BWI76_RS06735 at 1414.080 kb on + strand, within BWI76_RS06740 at 1414.090 kb on + strand, within BWI76_RS06740 at 1414.169 kb on + strand, within BWI76_RS06740 at 1414.533 kb on + strand, within BWI76_RS06745 at 1414.656 kb on + strand, within BWI76_RS06745 at 1414.752 kb on + strand at 1414.762 kb on + strand, within BWI76_RS06745 at 1414.893 kb on - strand at 1414.903 kb on - strand at 1415.175 kb on - strand, within BWI76_RS06750 at 1415.187 kb on + strand, within BWI76_RS06750 at 1415.187 kb on + strand, within BWI76_RS06750 at 1415.247 kb on + strand, within BWI76_RS06750 at 1415.264 kb on + strand, within BWI76_RS06750 at 1415.374 kb on - strand, within BWI76_RS06750 at 1415.424 kb on - strand, within BWI76_RS06750 at 1415.536 kb on - strand, within BWI76_RS06750 at 1415.548 kb on + strand, within BWI76_RS06750 at 1415.604 kb on + strand, within BWI76_RS06750 at 1415.612 kb on - strand, within BWI76_RS06750 at 1415.737 kb on + strand, within BWI76_RS06750 at 1415.802 kb on + strand, within BWI76_RS06750 at 1415.877 kb on + strand, within BWI76_RS06750 at 1415.885 kb on - strand, within BWI76_RS06750
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB17 MOI 0.1 remove 1,413,248 + BWI76_RS06730 0.59 +0.5 1,413,536 - BWI76_RS06730 0.86 +0.1 1,413,592 + +0.4 1,413,622 + +0.4 1,413,657 + +0.2 1,413,657 + +0.1 1,413,665 - +1.0 1,413,907 + BWI76_RS06735 0.40 +0.2 1,414,080 + BWI76_RS06740 0.11 +1.1 1,414,090 + BWI76_RS06740 0.18 +0.9 1,414,169 + BWI76_RS06740 0.74 -1.0 1,414,533 + BWI76_RS06745 0.47 -1.5 1,414,656 + BWI76_RS06745 0.65 -0.6 1,414,752 + -0.3 1,414,762 + BWI76_RS06745 0.80 -1.3 1,414,893 - -0.4 1,414,903 - +0.1 1,415,175 - BWI76_RS06750 0.12 -0.1 1,415,187 + BWI76_RS06750 0.13 -0.3 1,415,187 + BWI76_RS06750 0.13 -0.5 1,415,247 + BWI76_RS06750 0.17 +0.2 1,415,264 + BWI76_RS06750 0.18 +0.0 1,415,374 - BWI76_RS06750 0.26 +0.3 1,415,424 - BWI76_RS06750 0.29 +0.0 1,415,536 - BWI76_RS06750 0.37 -3.1 1,415,548 + BWI76_RS06750 0.38 -0.7 1,415,604 + BWI76_RS06750 0.41 -0.6 1,415,612 - BWI76_RS06750 0.42 -1.6 1,415,737 + BWI76_RS06750 0.51 +0.2 1,415,802 + BWI76_RS06750 0.55 -0.2 1,415,877 + BWI76_RS06750 0.60 -1.2 1,415,885 - BWI76_RS06750 0.61 -2.3
Or see this region's nucleotide sequence