Experiment: KLEB17 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02840 and BWI76_RS02845 are separated by 620 nucleotides BWI76_RS02845 and BWI76_RS02850 are separated by 94 nucleotides
BWI76_RS02840: BWI76_RS02840 - methylmalonate-semialdehyde dehydrogenase (CoA acylating), at 581,049 to 582,560
_RS02840
BWI76_RS02845: BWI76_RS02845 - hypothetical protein, at 583,181 to 583,732
_RS02845
BWI76_RS02850: BWI76_RS02850 - metalloprotease PmbA, at 583,827 to 585,179
_RS02850
Position (kb) 583
584 Strain fitness (log2 ratio) -2
-1
0
1
2 at 582.216 kb on + strand, within BWI76_RS02840 at 582.382 kb on - strand, within BWI76_RS02840 at 582.402 kb on - strand, within BWI76_RS02840 at 582.433 kb on - strand at 582.436 kb on + strand at 582.436 kb on + strand at 582.436 kb on + strand at 582.436 kb on + strand at 582.455 kb on - strand at 582.455 kb on - strand at 582.475 kb on + strand at 582.484 kb on - strand at 582.487 kb on + strand at 582.524 kb on - strand at 582.548 kb on + strand at 582.573 kb on + strand at 582.608 kb on + strand at 582.616 kb on + strand at 582.676 kb on + strand at 582.731 kb on - strand at 582.963 kb on + strand at 583.801 kb on + strand at 583.866 kb on - strand at 583.876 kb on + strand at 583.886 kb on - strand at 584.057 kb on - strand, within BWI76_RS02850 at 584.202 kb on - strand, within BWI76_RS02850 at 584.204 kb on + strand, within BWI76_RS02850 at 584.441 kb on + strand, within BWI76_RS02850 at 584.449 kb on - strand, within BWI76_RS02850 at 584.509 kb on + strand, within BWI76_RS02850 at 584.516 kb on - strand, within BWI76_RS02850
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB17 MOI 0.1 remove 582,216 + BWI76_RS02840 0.77 +0.4 582,382 - BWI76_RS02840 0.88 -0.9 582,402 - BWI76_RS02840 0.89 +1.3 582,433 - -0.2 582,436 + +0.2 582,436 + -0.5 582,436 + +2.1 582,436 + -0.8 582,455 - +0.5 582,455 - -0.4 582,475 + +0.8 582,484 - -1.1 582,487 + -0.9 582,524 - -0.4 582,548 + -0.1 582,573 + -0.9 582,608 + -0.5 582,616 + -1.0 582,676 + -0.3 582,731 - +0.0 582,963 + +0.1 583,801 + -0.9 583,866 - +0.3 583,876 + -2.1 583,886 - -0.0 584,057 - BWI76_RS02850 0.17 -0.6 584,202 - BWI76_RS02850 0.28 -1.3 584,204 + BWI76_RS02850 0.28 -0.4 584,441 + BWI76_RS02850 0.45 -1.7 584,449 - BWI76_RS02850 0.46 -0.6 584,509 + BWI76_RS02850 0.50 +0.4 584,516 - BWI76_RS02850 0.51 -0.9
Or see this region's nucleotide sequence