Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18960

Experiment: KLEB17 MOI 0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB17 MOI 0.1
3,930,909	+		BWI76_RS18950	0.82	-1.3
3,931,121	+		BWI76_RS18955	0.13	-0.1
3,931,498	-		BWI76_RS18955	0.76	-0.8
3,931,509	+		BWI76_RS18955	0.78	-1.8
3,931,517	+		BWI76_RS18955	0.79	-0.3
3,931,517	+		BWI76_RS18955	0.79	+0.6
3,931,640	-				+0.5
3,931,653	-				-0.2
3,931,674	+				-1.2
3,931,723	-				+0.3
3,931,762	+				-0.7
3,931,770	-				+0.2
3,931,816	-				+1.3
3,931,816	-				-0.2
3,931,910	-		BWI76_RS18960	0.14	+0.2
3,931,936	+		BWI76_RS18960	0.16	+1.1
3,932,013	+		BWI76_RS18960	0.22	-0.5
3,932,036	+		BWI76_RS18960	0.23	+2.0
3,932,045	-		BWI76_RS18960	0.24	-0.6
3,932,094	+				+2.7
3,932,094	+		BWI76_RS18960	0.28	-1.2
3,932,104	-		BWI76_RS18960	0.29	+0.3
3,932,112	+		BWI76_RS18960	0.29	+1.4
3,932,196	+		BWI76_RS18960	0.36	-3.1
3,932,196	+		BWI76_RS18960	0.36	-2.4
3,932,196	+		BWI76_RS18960	0.36	+1.1
3,932,196	+		BWI76_RS18960	0.36	+0.1
3,932,204	-		BWI76_RS18960	0.36	-0.5
3,932,204	-		BWI76_RS18960	0.36	-0.8
3,932,311	-		BWI76_RS18960	0.44	-0.3
3,932,311	-		BWI76_RS18960	0.44	-3.1
3,932,317	+		BWI76_RS18960	0.45	-0.6
3,932,326	-		BWI76_RS18960	0.45	-0.4
3,932,338	+		BWI76_RS18960	0.46	+1.4
3,932,341	+		BWI76_RS18960	0.47	+2.5
3,932,346	+		BWI76_RS18960	0.47	-2.1
3,932,346	+		BWI76_RS18960	0.47	-0.9
3,932,346	+		BWI76_RS18960	0.47	+2.8
3,932,346	+		BWI76_RS18960	0.47	-2.1
3,932,346	+		BWI76_RS18960	0.47	-1.7
3,932,346	+		BWI76_RS18960	0.47	-1.3
3,932,354	-		BWI76_RS18960	0.48	-0.3
3,932,354	-		BWI76_RS18960	0.48	-3.5
3,932,355	-		BWI76_RS18960	0.48	+0.9
3,932,444	-		BWI76_RS18960	0.54	-0.8
3,932,463	-		BWI76_RS18960	0.56	+0.0
3,932,463	-				-0.3
3,932,480	+		BWI76_RS18960	0.57	-0.7
3,932,513	-		BWI76_RS18960	0.60	-2.2
3,932,516	+		BWI76_RS18960	0.60	-0.3
3,932,516	+		BWI76_RS18960	0.60	-2.1
3,932,524	-		BWI76_RS18960	0.60	-3.2
3,932,524	-		BWI76_RS18960	0.60	+0.2
3,932,524	-		BWI76_RS18960	0.60	-1.1
3,932,570	+		BWI76_RS18960	0.64	-1.4
3,932,578	-		BWI76_RS18960	0.65	+0.1
3,932,585	-		BWI76_RS18960	0.65	-0.7
3,932,624	+		BWI76_RS18960	0.68	-1.5
3,932,624	+				+1.7
3,932,629	+		BWI76_RS18960	0.68	+0.2
3,932,632	-		BWI76_RS18960	0.69	-0.1
3,932,637	-		BWI76_RS18960	0.69	-2.3
3,932,651	-		BWI76_RS18960	0.70	+0.0
3,932,666	+		BWI76_RS18960	0.71	+2.7
3,932,678	-		BWI76_RS18960	0.72	-0.4
3,932,678	-		BWI76_RS18960	0.72	+1.4
3,932,685	-		BWI76_RS18960	0.73	+0.4
3,932,688	-		BWI76_RS18960	0.73	-1.1
3,932,688	-		BWI76_RS18960	0.73	+0.1
3,932,700	-		BWI76_RS18960	0.74	+0.0
3,932,702	+		BWI76_RS18960	0.74	-2.8
3,932,702	+		BWI76_RS18960	0.74	-1.0
3,932,702	+		BWI76_RS18960	0.74	-1.7
3,932,702	+		BWI76_RS18960	0.74	-0.6
3,932,702	+		BWI76_RS18960	0.74	-0.4
3,932,702	+		BWI76_RS18960	0.74	-0.5
3,932,702	+		BWI76_RS18960	0.74	-3.0
3,932,702	+		BWI76_RS18960	0.74	+0.3
3,932,702	+		BWI76_RS18960	0.74	+0.2
3,932,702	+		BWI76_RS18960	0.74	-1.4
3,932,702	+		BWI76_RS18960	0.74	-0.9
3,932,702	+		BWI76_RS18960	0.74	-1.7
3,932,702	+		BWI76_RS18960	0.74	-0.3
3,932,702	+		BWI76_RS18960	0.74	-2.0
3,932,702	+		BWI76_RS18960	0.74	-1.2
3,932,702	+		BWI76_RS18960	0.74	-2.0
3,932,702	+		BWI76_RS18960	0.74	-2.7
3,932,710	-		BWI76_RS18960	0.75	-1.0
3,932,710	-		BWI76_RS18960	0.75	-2.1
3,932,710	-		BWI76_RS18960	0.75	+1.8
3,932,710	-		BWI76_RS18960	0.75	+0.1
3,932,710	-		BWI76_RS18960	0.75	-3.5
3,932,710	-		BWI76_RS18960	0.75	+0.4
3,932,710	-		BWI76_RS18960	0.75	+0.8
3,932,710	-		BWI76_RS18960	0.75	+0.0
3,932,710	-		BWI76_RS18960	0.75	+0.2
3,932,710	-		BWI76_RS18960	0.75	-0.2
3,932,710	-		BWI76_RS18960	0.75	-0.9
3,932,710	-		BWI76_RS18960	0.75	-2.4
3,932,710	-		BWI76_RS18960	0.75	-0.1
3,932,710	-		BWI76_RS18960	0.75	-0.1
3,932,710	-		BWI76_RS18960	0.75	-1.3
3,932,710	-		BWI76_RS18960	0.75	-0.4
3,932,710	-		BWI76_RS18960	0.75	-0.1
3,932,710	-		BWI76_RS18960	0.75	-0.4
3,932,710	-		BWI76_RS18960	0.75	+0.4
3,932,710	-		BWI76_RS18960	0.75	-0.6
3,932,710	-				+0.7
3,932,710	-		BWI76_RS18960	0.75	+1.9
3,932,711	-		BWI76_RS18960	0.75	+0.0
3,932,725	-		BWI76_RS18960	0.76	-0.6
3,932,752	-		BWI76_RS18960	0.78	-1.3
3,932,795	-		BWI76_RS18960	0.81	+0.5
3,932,827	-		BWI76_RS18960	0.83	-0.3
3,932,843	-		BWI76_RS18960	0.85	+1.2
3,932,854	-		BWI76_RS18960	0.85	+0.0
3,932,890	-		BWI76_RS18960	0.88	-0.2
3,932,958	-				-0.7
3,933,000	-				+0.8
3,933,026	-				-2.2
3,933,026	-				-2.0
3,933,026	-				-1.7
3,933,026	-				-1.2
3,933,026	-				-1.4
3,933,026	-				-2.5
3,933,026	-				-0.8
3,933,114	-				-1.2
3,933,114	-				+1.0
3,933,116	-				-1.2
3,933,132	+				-2.0
3,933,166	-				+0.3
3,933,173	-				-2.3
3,933,185	-				-3.0
3,933,185	-				+4.8
3,933,185	-				+0.9
3,933,185	-				-0.8
3,933,190	-				-1.7
3,933,190	-				+0.7
3,933,195	-				+1.1
3,933,206	-				+0.2
3,933,214	-				-1.6
3,933,229	-				-1.7
3,933,285	-				+0.3
3,933,332	-		BWI76_RS18965	0.13	-0.1
3,933,347	-		BWI76_RS18965	0.15	+0.2
3,933,382	+		BWI76_RS18965	0.18	-1.7
3,933,390	-		BWI76_RS18965	0.19	+0.0
3,933,390	-		BWI76_RS18965	0.19	+0.9
3,933,392	+		BWI76_RS18965	0.19	-0.1
3,933,392	+		BWI76_RS18965	0.19	-2.3
3,933,400	+		BWI76_RS18965	0.19	+1.7
3,933,400	+		BWI76_RS18965	0.19	+1.4
3,933,400	-		BWI76_RS18965	0.19	-1.7
3,933,402	-		BWI76_RS18965	0.20	+0.2
3,933,408	-		BWI76_RS18965	0.20	+0.2
3,933,408	-		BWI76_RS18965	0.20	+0.3
3,933,408	-		BWI76_RS18965	0.20	-0.3
3,933,411	+		BWI76_RS18965	0.20	-2.1
3,933,411	+				-0.7
3,933,411	+		BWI76_RS18965	0.20	-1.1
3,933,411	+		BWI76_RS18965	0.20	-2.1
3,933,419	-		BWI76_RS18965	0.21	-0.7
3,933,419	-		BWI76_RS18965	0.21	-0.3
3,933,419	-		BWI76_RS18965	0.21	+0.5
3,933,419	-		BWI76_RS18965	0.21	-0.4
3,933,424	-		BWI76_RS18965	0.22	-0.3
3,933,443	-		BWI76_RS18965	0.23	+0.4
3,933,443	-		BWI76_RS18965	0.23	-0.5
3,933,445	+		BWI76_RS18965	0.23	+1.7
3,933,460	+		BWI76_RS18965	0.25	-0.3
3,933,468	-		BWI76_RS18965	0.25	+0.1
3,933,468	-		BWI76_RS18965	0.25	+0.3
3,933,479	-		BWI76_RS18965	0.26	-0.7
3,933,481	+		BWI76_RS18965	0.27	-1.6
3,933,489	+		BWI76_RS18965	0.27	+0.1
3,933,489	+		BWI76_RS18965	0.27	+1.0
3,933,489	-		BWI76_RS18965	0.27	+0.7
3,933,497	-		BWI76_RS18965	0.28	-0.4
3,933,508	+		BWI76_RS18965	0.29	+0.2
3,933,508	+		BWI76_RS18965	0.29	-1.7
3,933,517	+		BWI76_RS18965	0.30	+1.5
3,933,517	+		BWI76_RS18965	0.30	-2.3
3,933,517	+		BWI76_RS18965	0.30	-0.3
3,933,525	-		BWI76_RS18965	0.31	-0.3
3,933,525	-		BWI76_RS18965	0.31	+0.1
3,933,525	-		BWI76_RS18965	0.31	-0.4
3,933,525	-		BWI76_RS18965	0.31	-0.2
3,933,525	-		BWI76_RS18965	0.31	+2.1
3,933,529	+		BWI76_RS18965	0.31	+0.7
3,933,529	+		BWI76_RS18965	0.31	-1.9
3,933,537	-		BWI76_RS18965	0.32	+0.6
3,933,537	-		BWI76_RS18965	0.32	-2.0
3,933,545	-		BWI76_RS18965	0.32	+0.3
3,933,552	+		BWI76_RS18965	0.33	-0.7
3,933,560	+		BWI76_RS18965	0.34	-2.4
3,933,560	+		BWI76_RS18965	0.34	+1.4
3,933,560	-		BWI76_RS18965	0.34	+0.4
3,933,560	-		BWI76_RS18965	0.34	-0.7
3,933,560	-		BWI76_RS18965	0.34	-0.2
3,933,560	-		BWI76_RS18965	0.34	-0.6
3,933,581	+		BWI76_RS18965	0.35	+0.2
3,933,615	-		BWI76_RS18965	0.38	-0.3
3,933,694	-		BWI76_RS18965	0.45	-0.0
3,933,695	-		BWI76_RS18965	0.46	+1.2
3,933,696	-		BWI76_RS18965	0.46	-1.6
3,933,701	-		BWI76_RS18965	0.46	+0.4
3,933,701	-		BWI76_RS18965	0.46	-0.1
3,933,708	-		BWI76_RS18965	0.47	-1.2
3,933,708	-		BWI76_RS18965	0.47	-0.3
3,933,708	-		BWI76_RS18965	0.47	+0.1
3,933,708	-		BWI76_RS18965	0.47	-1.3
3,933,708	-		BWI76_RS18965	0.47	+1.0
3,933,718	-		BWI76_RS18965	0.48	-1.2
3,933,721	-		BWI76_RS18965	0.48	+0.1
3,933,738	-		BWI76_RS18965	0.49	+0.3
3,933,738	-		BWI76_RS18965	0.49	-0.4
3,933,740	-		BWI76_RS18965	0.49	-2.2
3,933,740	-		BWI76_RS18965	0.49	+0.4
3,933,745	-		BWI76_RS18965	0.50	-1.0
3,933,778	-		BWI76_RS18965	0.53	+0.7
3,933,778	-		BWI76_RS18965	0.53	+0.0
3,933,778	-		BWI76_RS18965	0.53	-0.5
3,933,800	-		BWI76_RS18965	0.55	+2.0
3,933,868	-		BWI76_RS18965	0.61	-3.0
3,933,870	-		BWI76_RS18965	0.61	-0.3
3,933,894	-		BWI76_RS18965	0.63	-2.7
3,933,901	-		BWI76_RS18965	0.64	-0.4
3,933,932	-		BWI76_RS18965	0.66	-0.3
3,933,932	-		BWI76_RS18965	0.66	+0.2
3,933,933	-		BWI76_RS18965	0.66	+0.1
3,933,933	-		BWI76_RS18965	0.66	+1.3
3,933,967	-		BWI76_RS18965	0.69	-0.0
3,934,027	-		BWI76_RS18965	0.75	-3.3
3,934,032	-		BWI76_RS18965	0.75	-0.4
3,934,032	-		BWI76_RS18965	0.75	-0.5
3,934,032	-		BWI76_RS18965	0.75	+0.5
3,934,032	-		BWI76_RS18965	0.75	-0.6
3,934,042	-		BWI76_RS18965	0.76	-1.0
3,934,044	-		BWI76_RS18965	0.76	-0.9
3,934,044	-		BWI76_RS18965	0.76	+0.4
3,934,044	-		BWI76_RS18965	0.76	+0.6