Experiment: KLEB17 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06075 and BWI76_RS06080 overlap by 4 nucleotides BWI76_RS06080 and BWI76_RS06085 are separated by 82 nucleotides BWI76_RS06085 and BWI76_RS06090 are separated by 404 nucleotides
BWI76_RS06075: BWI76_RS06075 - taurine transporter subunit, at 1,276,636 to 1,277,463
_RS06075
BWI76_RS06080: BWI76_RS06080 - taurine dioxygenase, at 1,277,460 to 1,278,311
_RS06080
BWI76_RS06085: BWI76_RS06085 - hypothetical protein, at 1,278,394 to 1,280,112
_RS06085
BWI76_RS06090: BWI76_RS06090 - delta-aminolevulinic acid dehydratase, at 1,280,517 to 1,281,491
_RS06090
Position (kb)
1278
1279
1280
1281 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1277.902 kb on - strand, within BWI76_RS06080 at 1278.216 kb on + strand, within BWI76_RS06080 at 1278.224 kb on - strand, within BWI76_RS06080 at 1278.257 kb on + strand at 1278.460 kb on + strand at 1278.468 kb on - strand at 1278.552 kb on + strand at 1278.554 kb on + strand at 1278.563 kb on + strand at 1278.801 kb on + strand, within BWI76_RS06085 at 1278.847 kb on - strand, within BWI76_RS06085 at 1278.878 kb on - strand, within BWI76_RS06085 at 1278.888 kb on + strand, within BWI76_RS06085 at 1278.896 kb on - strand, within BWI76_RS06085 at 1278.957 kb on + strand, within BWI76_RS06085 at 1279.406 kb on - strand, within BWI76_RS06085 at 1279.511 kb on + strand, within BWI76_RS06085 at 1279.519 kb on - strand, within BWI76_RS06085 at 1279.831 kb on + strand, within BWI76_RS06085 at 1279.831 kb on + strand, within BWI76_RS06085 at 1279.831 kb on + strand, within BWI76_RS06085 at 1279.976 kb on - strand at 1280.071 kb on - strand at 1280.083 kb on - strand at 1280.165 kb on + strand at 1280.371 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB17 MOI 0.1 remove 1,277,902 - BWI76_RS06080 0.52 -0.2 1,278,216 + BWI76_RS06080 0.89 +0.5 1,278,224 - BWI76_RS06080 0.90 -0.1 1,278,257 + -0.3 1,278,460 + +0.7 1,278,468 - -0.0 1,278,552 + +0.0 1,278,554 + +0.9 1,278,563 + -2.7 1,278,801 + BWI76_RS06085 0.24 +2.1 1,278,847 - BWI76_RS06085 0.26 +0.4 1,278,878 - BWI76_RS06085 0.28 +0.2 1,278,888 + BWI76_RS06085 0.29 +0.6 1,278,896 - BWI76_RS06085 0.29 +0.5 1,278,957 + BWI76_RS06085 0.33 +0.5 1,279,406 - BWI76_RS06085 0.59 -0.2 1,279,511 + BWI76_RS06085 0.65 +1.0 1,279,519 - BWI76_RS06085 0.65 +1.2 1,279,831 + BWI76_RS06085 0.84 +1.0 1,279,831 + BWI76_RS06085 0.84 -1.6 1,279,831 + BWI76_RS06085 0.84 +0.1 1,279,976 - +0.4 1,280,071 - +0.8 1,280,083 - -1.1 1,280,165 + +0.2 1,280,371 + +0.6
Or see this region's nucleotide sequence