Experiment: KLEB17 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21750 and BWI76_RS21755 are separated by 14 nucleotides BWI76_RS21755 and BWI76_RS21760 are separated by 100 nucleotides BWI76_RS21760 and BWI76_RS21765 are separated by 105 nucleotides
BWI76_RS21750: BWI76_RS21750 - amidohydrolase family protein, at 4,545,979 to 4,547,376
_RS21750
BWI76_RS21755: BWI76_RS21755 - hypothetical protein, at 4,547,391 to 4,547,864
_RS21755
BWI76_RS21760: BWI76_RS21760 - SMP-30/gluconolactonase/LRE family protein, at 4,547,965 to 4,548,825
_RS21760
BWI76_RS21765: BWI76_RS21765 - NmrA family protein, at 4,548,931 to 4,549,884
_RS21765
Position (kb) 4547
4548
4549 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 4547.043 kb on + strand, within BWI76_RS21750 at 4547.050 kb on + strand, within BWI76_RS21750 at 4547.119 kb on - strand, within BWI76_RS21750 at 4547.248 kb on + strand at 4547.256 kb on - strand at 4547.434 kb on + strand at 4547.451 kb on + strand, within BWI76_RS21755 at 4547.520 kb on + strand, within BWI76_RS21755 at 4547.570 kb on - strand, within BWI76_RS21755 at 4547.645 kb on - strand, within BWI76_RS21755 at 4547.747 kb on + strand, within BWI76_RS21755 at 4547.760 kb on - strand, within BWI76_RS21755 at 4547.926 kb on - strand at 4548.139 kb on - strand, within BWI76_RS21760 at 4548.267 kb on - strand, within BWI76_RS21760 at 4548.386 kb on + strand, within BWI76_RS21760 at 4548.439 kb on + strand, within BWI76_RS21760 at 4548.489 kb on - strand, within BWI76_RS21760 at 4548.564 kb on + strand, within BWI76_RS21760 at 4548.637 kb on + strand, within BWI76_RS21760 at 4548.655 kb on + strand, within BWI76_RS21760 at 4548.710 kb on - strand, within BWI76_RS21760 at 4548.710 kb on - strand, within BWI76_RS21760 at 4548.820 kb on + strand at 4548.828 kb on - strand at 4549.045 kb on - strand, within BWI76_RS21765 at 4549.128 kb on - strand, within BWI76_RS21765 at 4549.184 kb on - strand, within BWI76_RS21765 at 4549.186 kb on + strand, within BWI76_RS21765 at 4549.194 kb on - strand, within BWI76_RS21765 at 4549.253 kb on + strand, within BWI76_RS21765 at 4549.272 kb on + strand, within BWI76_RS21765 at 4549.333 kb on + strand, within BWI76_RS21765 at 4549.409 kb on + strand, within BWI76_RS21765 at 4549.472 kb on - strand, within BWI76_RS21765 at 4549.499 kb on + strand, within BWI76_RS21765 at 4549.555 kb on - strand, within BWI76_RS21765 at 4549.597 kb on + strand, within BWI76_RS21765 at 4549.597 kb on + strand, within BWI76_RS21765 at 4549.597 kb on + strand, within BWI76_RS21765 at 4549.597 kb on + strand, within BWI76_RS21765 at 4549.597 kb on + strand, within BWI76_RS21765 at 4549.605 kb on - strand, within BWI76_RS21765 at 4549.605 kb on - strand, within BWI76_RS21765 at 4549.605 kb on - strand, within BWI76_RS21765 at 4549.605 kb on - strand, within BWI76_RS21765 at 4549.605 kb on - strand, within BWI76_RS21765 at 4549.659 kb on - strand, within BWI76_RS21765 at 4549.733 kb on - strand, within BWI76_RS21765 at 4549.812 kb on + strand at 4549.819 kb on + strand at 4549.822 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB17 MOI 1 remove 4,547,043 + BWI76_RS21750 0.76 +0.3 4,547,050 + BWI76_RS21750 0.77 +0.2 4,547,119 - BWI76_RS21750 0.82 +1.0 4,547,248 + -1.2 4,547,256 - -1.4 4,547,434 + +0.3 4,547,451 + BWI76_RS21755 0.13 +0.7 4,547,520 + BWI76_RS21755 0.27 -3.4 4,547,570 - BWI76_RS21755 0.38 -0.8 4,547,645 - BWI76_RS21755 0.54 +1.7 4,547,747 + BWI76_RS21755 0.75 +0.0 4,547,760 - BWI76_RS21755 0.78 -2.2 4,547,926 - -2.1 4,548,139 - BWI76_RS21760 0.20 +0.2 4,548,267 - BWI76_RS21760 0.35 -0.1 4,548,386 + BWI76_RS21760 0.49 -2.2 4,548,439 + BWI76_RS21760 0.55 -0.4 4,548,489 - BWI76_RS21760 0.61 +1.9 4,548,564 + BWI76_RS21760 0.70 -0.7 4,548,637 + BWI76_RS21760 0.78 -1.3 4,548,655 + BWI76_RS21760 0.80 -0.1 4,548,710 - BWI76_RS21760 0.87 -2.8 4,548,710 - BWI76_RS21760 0.87 -2.3 4,548,820 + +0.4 4,548,828 - -2.4 4,549,045 - BWI76_RS21765 0.12 -2.1 4,549,128 - BWI76_RS21765 0.21 +0.5 4,549,184 - BWI76_RS21765 0.27 -1.6 4,549,186 + BWI76_RS21765 0.27 +0.2 4,549,194 - BWI76_RS21765 0.28 +0.2 4,549,253 + BWI76_RS21765 0.34 +3.9 4,549,272 + BWI76_RS21765 0.36 -0.8 4,549,333 + BWI76_RS21765 0.42 -1.2 4,549,409 + BWI76_RS21765 0.50 -0.5 4,549,472 - BWI76_RS21765 0.57 -0.5 4,549,499 + BWI76_RS21765 0.60 +0.6 4,549,555 - BWI76_RS21765 0.65 +0.3 4,549,597 + BWI76_RS21765 0.70 +0.8 4,549,597 + BWI76_RS21765 0.70 -1.7 4,549,597 + BWI76_RS21765 0.70 +1.0 4,549,597 + BWI76_RS21765 0.70 -0.4 4,549,597 + BWI76_RS21765 0.70 +1.1 4,549,605 - BWI76_RS21765 0.71 -1.8 4,549,605 - BWI76_RS21765 0.71 +0.1 4,549,605 - BWI76_RS21765 0.71 -0.1 4,549,605 - BWI76_RS21765 0.71 -0.7 4,549,605 - BWI76_RS21765 0.71 +0.3 4,549,659 - BWI76_RS21765 0.76 -0.9 4,549,733 - BWI76_RS21765 0.84 +0.8 4,549,812 + +1.4 4,549,819 + -0.7 4,549,822 - +1.3
Or see this region's nucleotide sequence