Experiment: KLEB17 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17650 and BWI76_RS17655 are separated by 103 nucleotides BWI76_RS17655 and BWI76_RS17660 are separated by 94 nucleotides BWI76_RS17660 and BWI76_RS17665 overlap by 16 nucleotides
BWI76_RS17650: BWI76_RS17650 - putative fatty acid desaturase, at 3,666,416 to 3,667,399
_RS17650
BWI76_RS17655: BWI76_RS17655 - MFS transporter, at 3,667,503 to 3,668,642
_RS17655
BWI76_RS17660: BWI76_RS17660 - AraC/XylS familytranscription regulator, at 3,668,737 to 3,669,504
_RS17660
BWI76_RS17665: BWI76_RS17665 - proteasome-type protease, at 3,669,489 to 3,670,241
_RS17665
Position (kb)
3667
3668
3669 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3666.654 kb on - strand, within BWI76_RS17650 at 3666.656 kb on + strand, within BWI76_RS17650 at 3666.659 kb on - strand, within BWI76_RS17650 at 3666.686 kb on + strand, within BWI76_RS17650 at 3667.080 kb on + strand, within BWI76_RS17650 at 3667.188 kb on + strand, within BWI76_RS17650 at 3667.189 kb on + strand, within BWI76_RS17650 at 3667.508 kb on - strand at 3668.127 kb on - strand, within BWI76_RS17655 at 3668.136 kb on + strand, within BWI76_RS17655 at 3668.221 kb on + strand, within BWI76_RS17655 at 3668.281 kb on - strand, within BWI76_RS17655 at 3668.469 kb on + strand, within BWI76_RS17655 at 3668.671 kb on + strand at 3668.946 kb on - strand at 3669.018 kb on + strand, within BWI76_RS17660 at 3669.057 kb on - strand, within BWI76_RS17660
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB17 MOI 1 remove 3,666,654 - BWI76_RS17650 0.24 -0.1 3,666,656 + BWI76_RS17650 0.24 -0.9 3,666,659 - BWI76_RS17650 0.25 +1.7 3,666,686 + BWI76_RS17650 0.27 +0.0 3,667,080 + BWI76_RS17650 0.67 +0.1 3,667,188 + BWI76_RS17650 0.78 +0.7 3,667,189 + BWI76_RS17650 0.79 +0.4 3,667,508 - +0.7 3,668,127 - BWI76_RS17655 0.55 -3.3 3,668,136 + BWI76_RS17655 0.56 +0.4 3,668,221 + BWI76_RS17655 0.63 +0.7 3,668,281 - BWI76_RS17655 0.68 +1.0 3,668,469 + BWI76_RS17655 0.85 +2.4 3,668,671 + +0.7 3,668,946 - -0.7 3,669,018 + BWI76_RS17660 0.37 +0.2 3,669,057 - BWI76_RS17660 0.42 +0.1
Or see this region's nucleotide sequence