Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17170

Experiment: KLEB17 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB17 MOI 1
3,558,090	-		BWI76_RS17155	0.57	-0.4
3,558,122	-		BWI76_RS17155	0.72	-3.1
3,558,183	-				-2.7
3,558,188	+				+1.2
3,558,188	+				+0.3
3,558,188	+				-1.3
3,558,188	+				-0.4
3,558,188	+				+1.2
3,558,196	-				-0.4
3,558,196	-				+0.0
3,558,227	-				+0.6
3,558,308	-		BWI76_RS17160	0.38	-1.6
3,558,310	+		BWI76_RS17160	0.39	+1.1
3,558,333	+		BWI76_RS17160	0.50	-2.9
3,558,395	+		BWI76_RS17160	0.78	-0.3
3,558,395	+		BWI76_RS17160	0.78	+0.6
3,558,395	+		BWI76_RS17160	0.78	+1.7
3,558,395	+		BWI76_RS17160	0.78	+1.3
3,558,398	-		BWI76_RS17160	0.79	-0.6
3,558,402	-		BWI76_RS17160	0.81	-1.9
3,558,403	-		BWI76_RS17160	0.82	+0.6
3,558,403	-		BWI76_RS17160	0.82	-1.0
3,558,403	-		BWI76_RS17160	0.82	-2.3
3,558,403	-		BWI76_RS17160	0.82	-0.8
3,558,405	+		BWI76_RS17160	0.83	+1.1
3,558,405	+		BWI76_RS17160	0.83	-0.2
3,558,413	-		BWI76_RS17160	0.86	-1.0
3,558,443	-				+0.5
3,558,454	-				+0.4
3,558,455	+				+2.4
3,558,463	+				+0.7
3,558,472	+				-0.4
3,558,480	+				+0.6
3,558,502	+		BWI76_RS17165	0.19	+0.8
3,558,503	+		BWI76_RS17165	0.20	-1.7
3,558,511	-		BWI76_RS17165	0.23	+0.3
3,558,521	-		BWI76_RS17165	0.27	-1.0
3,558,534	+		BWI76_RS17165	0.33	-0.4
3,558,541	+				+2.1
3,558,547	-		BWI76_RS17165	0.38	-1.6
3,558,549	-		BWI76_RS17165	0.39	-0.3
3,558,577	+		BWI76_RS17165	0.51	-2.1
3,558,577	+		BWI76_RS17165	0.51	+0.3
3,558,592	+		BWI76_RS17165	0.58	-2.6
3,558,643	-		BWI76_RS17165	0.79	+2.1
3,558,643	-		BWI76_RS17165	0.79	+0.1
3,558,647	+		BWI76_RS17165	0.81	+0.6
3,558,652	-		BWI76_RS17165	0.83	+0.6
3,558,655	-		BWI76_RS17165	0.85	+1.1
3,558,736	+				-0.0
3,558,736	+				+0.4
3,558,744	-				+1.8
3,558,744	-				+2.1
3,558,744	-				+0.1
3,558,746	+				+3.0
3,558,746	+				-1.2
3,558,746	+				+2.7
3,558,746	+				+0.3
3,558,746	+				+1.6
3,558,746	+				-0.8
3,558,746	+				+0.7
3,558,746	+				+1.6
3,558,748	+				+0.2
3,558,754	+				-3.4
3,558,754	-				+1.3
3,558,754	-				+1.1
3,558,754	-				+0.6
3,558,756	+				-2.4
3,558,756	+				-0.1
3,558,756	+				+1.7
3,558,756	+				+0.0
3,558,756	+				-2.1
3,558,756	+				+0.4
3,558,756	+				+2.1
3,558,756	-				+0.5
3,558,759	-				+0.3
3,558,764	-				-0.4
3,558,764	-				+0.6
3,558,764	-				+0.2
3,558,764	-				-1.6
3,558,764	-				-2.2
3,558,764	-				-0.6
3,558,764	-				-2.4
3,558,764	-				-1.2
3,558,940	+				-1.7
3,558,989	-				-0.3
3,558,989	-				-0.9
3,559,005	-				-2.5
3,559,013	-				-5.2
3,559,016	+				+0.9
3,559,031	+				+2.4
3,559,034	-				-0.4
3,559,044	+		BWI76_RS17170	0.11	-0.5
3,559,053	-		BWI76_RS17170	0.12	+0.7
3,559,055	+		BWI76_RS17170	0.12	+0.1
3,559,087	+		BWI76_RS17170	0.17	-0.9
3,559,087	+		BWI76_RS17170	0.17	-1.4
3,559,087	+		BWI76_RS17170	0.17	-0.2
3,559,105	-		BWI76_RS17170	0.19	-2.6
3,559,105	-		BWI76_RS17170	0.19	+1.5
3,559,146	+		BWI76_RS17170	0.24	-0.3
3,559,248	+		BWI76_RS17170	0.38	+0.7
3,559,278	+		BWI76_RS17170	0.42	+0.3
3,559,311	-		BWI76_RS17170	0.46	-0.1
3,559,348	-		BWI76_RS17170	0.51	-2.6
3,559,398	+		BWI76_RS17170	0.58	+0.1
3,559,514	+		BWI76_RS17170	0.73	-1.2
3,559,615	-		BWI76_RS17170	0.86	-0.5
3,559,626	-		BWI76_RS17170	0.88	+1.5
3,559,750	+				-3.1
3,559,753	-				+0.3
3,559,770	-				+2.7
3,559,852	-				+1.3
3,559,874	+				-1.9
3,560,031	+				-1.6
3,560,039	-				+0.4
3,560,041	+				+0.8
3,560,140	+		BWI76_RS17175	0.14	+1.9