Experiment: KLEB17 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14265 and BWI76_RS14270 are separated by 365 nucleotides BWI76_RS14270 and BWI76_RS14275 are separated by 387 nucleotides
BWI76_RS14265: BWI76_RS14265 - LysR family transcriptional regulator, at 2,983,089 to 2,984,027
_RS14265
BWI76_RS14270: BWI76_RS14270 - transporter, at 2,984,393 to 2,985,205
_RS14270
BWI76_RS14275: BWI76_RS14275 - hypothetical protein, at 2,985,593 to 2,986,789
_RS14275
Position (kb)
2984
2985
2986 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2983.406 kb on - strand, within BWI76_RS14265 at 2983.534 kb on + strand, within BWI76_RS14265 at 2983.636 kb on + strand, within BWI76_RS14265 at 2983.757 kb on + strand, within BWI76_RS14265 at 2983.757 kb on + strand, within BWI76_RS14265 at 2983.757 kb on + strand, within BWI76_RS14265 at 2983.765 kb on - strand, within BWI76_RS14265 at 2983.819 kb on + strand, within BWI76_RS14265 at 2983.862 kb on - strand, within BWI76_RS14265 at 2983.862 kb on - strand, within BWI76_RS14265 at 2983.872 kb on - strand, within BWI76_RS14265 at 2983.993 kb on - strand at 2984.010 kb on + strand at 2984.020 kb on + strand at 2984.022 kb on + strand at 2984.029 kb on - strand at 2984.478 kb on - strand, within BWI76_RS14270 at 2984.538 kb on - strand, within BWI76_RS14270 at 2984.642 kb on - strand, within BWI76_RS14270 at 2984.673 kb on + strand, within BWI76_RS14270 at 2984.673 kb on + strand, within BWI76_RS14270 at 2984.775 kb on + strand, within BWI76_RS14270 at 2984.835 kb on - strand at 2984.938 kb on + strand, within BWI76_RS14270 at 2985.009 kb on + strand, within BWI76_RS14270 at 2985.033 kb on + strand, within BWI76_RS14270 at 2985.267 kb on + strand at 2985.269 kb on + strand at 2985.269 kb on + strand at 2985.270 kb on - strand at 2985.277 kb on - strand at 2985.386 kb on + strand at 2985.423 kb on - strand at 2985.449 kb on + strand at 2985.449 kb on + strand at 2985.449 kb on + strand at 2985.449 kb on + strand at 2985.449 kb on + strand at 2985.450 kb on + strand at 2985.457 kb on - strand at 2985.457 kb on - strand at 2985.465 kb on - strand at 2985.495 kb on + strand at 2985.495 kb on + strand at 2985.495 kb on + strand at 2985.495 kb on + strand at 2985.495 kb on + strand at 2985.495 kb on + strand at 2985.501 kb on + strand at 2985.503 kb on + strand at 2985.514 kb on + strand at 2985.522 kb on - strand at 2985.661 kb on + strand at 2985.707 kb on - strand at 2985.748 kb on - strand, within BWI76_RS14275 at 2985.754 kb on - strand, within BWI76_RS14275 at 2985.868 kb on + strand, within BWI76_RS14275 at 2985.882 kb on - strand, within BWI76_RS14275 at 2986.088 kb on + strand, within BWI76_RS14275
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB17 MOI 1 remove 2,983,406 - BWI76_RS14265 0.34 +1.2 2,983,534 + BWI76_RS14265 0.47 +0.6 2,983,636 + BWI76_RS14265 0.58 -2.1 2,983,757 + BWI76_RS14265 0.71 +0.2 2,983,757 + BWI76_RS14265 0.71 +1.2 2,983,757 + BWI76_RS14265 0.71 +1.2 2,983,765 - BWI76_RS14265 0.72 +0.6 2,983,819 + BWI76_RS14265 0.78 -2.7 2,983,862 - BWI76_RS14265 0.82 +1.8 2,983,862 - BWI76_RS14265 0.82 +2.2 2,983,872 - BWI76_RS14265 0.83 +0.8 2,983,993 - +0.6 2,984,010 + -1.6 2,984,020 + -1.8 2,984,022 + -0.1 2,984,029 - -0.8 2,984,478 - BWI76_RS14270 0.10 -2.9 2,984,538 - BWI76_RS14270 0.18 -1.3 2,984,642 - BWI76_RS14270 0.31 -0.8 2,984,673 + BWI76_RS14270 0.34 -1.3 2,984,673 + BWI76_RS14270 0.34 +2.8 2,984,775 + BWI76_RS14270 0.47 -3.4 2,984,835 - +2.2 2,984,938 + BWI76_RS14270 0.67 -1.6 2,985,009 + BWI76_RS14270 0.76 -2.7 2,985,033 + BWI76_RS14270 0.79 -0.4 2,985,267 + -0.4 2,985,269 + +2.8 2,985,269 + +1.2 2,985,270 - +0.7 2,985,277 - -1.4 2,985,386 + -0.4 2,985,423 - -1.6 2,985,449 + -1.7 2,985,449 + +0.6 2,985,449 + -1.0 2,985,449 + -0.9 2,985,449 + +0.6 2,985,450 + -0.2 2,985,457 - +2.2 2,985,457 - +1.2 2,985,465 - +2.2 2,985,495 + -0.7 2,985,495 + -1.2 2,985,495 + -0.6 2,985,495 + -1.0 2,985,495 + -2.1 2,985,495 + -0.8 2,985,501 + -2.1 2,985,503 + -0.2 2,985,514 + -0.8 2,985,522 - +2.2 2,985,661 + -0.2 2,985,707 - +0.4 2,985,748 - BWI76_RS14275 0.13 +0.6 2,985,754 - BWI76_RS14275 0.13 +0.9 2,985,868 + BWI76_RS14275 0.23 -0.6 2,985,882 - BWI76_RS14275 0.24 -1.0 2,986,088 + BWI76_RS14275 0.41 +2.0
Or see this region's nucleotide sequence