Experiment: KLEB17 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14150 and BWI76_RS14155 are separated by 3 nucleotides BWI76_RS14155 and BWI76_RS14160 are separated by 11 nucleotides
BWI76_RS14150: BWI76_RS14150 - dihydrolipoyllysine-residue acetyltransferase, at 2,959,986 to 2,961,515
_RS14150
BWI76_RS14155: BWI76_RS14155 - transketolase, at 2,961,519 to 2,962,538
_RS14155
BWI76_RS14160: BWI76_RS14160 - ABC transporter substrate-binding protein, at 2,962,550 to 2,963,512
_RS14160
Position (kb)
2961
2962
2963 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2961.052 kb on - strand, within BWI76_RS14150 at 2961.084 kb on + strand, within BWI76_RS14150 at 2961.119 kb on + strand, within BWI76_RS14150 at 2961.200 kb on + strand, within BWI76_RS14150 at 2961.600 kb on - strand at 2961.600 kb on - strand at 2961.602 kb on + strand at 2962.064 kb on + strand, within BWI76_RS14155 at 2962.351 kb on - strand, within BWI76_RS14155 at 2962.356 kb on - strand, within BWI76_RS14155 at 2962.457 kb on - strand at 2962.690 kb on - strand, within BWI76_RS14160 at 2962.964 kb on + strand, within BWI76_RS14160 at 2963.020 kb on - strand, within BWI76_RS14160 at 2963.198 kb on - strand, within BWI76_RS14160 at 2963.241 kb on + strand, within BWI76_RS14160 at 2963.375 kb on + strand, within BWI76_RS14160 at 2963.388 kb on + strand, within BWI76_RS14160 at 2963.481 kb on + strand at 2963.481 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB17 MOI 1 remove 2,961,052 - BWI76_RS14150 0.70 -0.1 2,961,084 + BWI76_RS14150 0.72 +0.3 2,961,119 + BWI76_RS14150 0.74 -1.9 2,961,200 + BWI76_RS14150 0.79 +0.9 2,961,600 - -0.3 2,961,600 - -0.9 2,961,602 + -3.8 2,962,064 + BWI76_RS14155 0.53 -3.1 2,962,351 - BWI76_RS14155 0.82 -1.0 2,962,356 - BWI76_RS14155 0.82 -1.4 2,962,457 - +1.4 2,962,690 - BWI76_RS14160 0.15 -3.5 2,962,964 + BWI76_RS14160 0.43 +0.9 2,963,020 - BWI76_RS14160 0.49 -2.5 2,963,198 - BWI76_RS14160 0.67 -0.8 2,963,241 + BWI76_RS14160 0.72 +0.5 2,963,375 + BWI76_RS14160 0.86 -0.7 2,963,388 + BWI76_RS14160 0.87 -0.6 2,963,481 + +2.7 2,963,481 + -0.3
Or see this region's nucleotide sequence