Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13015
Experiment: KLEB17 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB17 MOI 1 |
---|---|---|---|---|---|
remove | |||||
2,714,843 | - | BWI76_RS13010 | 0.39 | -0.4 | |
2,715,004 | + | BWI76_RS13010 | 0.56 | +1.0 | |
2,715,092 | - | BWI76_RS13010 | 0.66 | +0.1 | |
2,715,184 | + | BWI76_RS13010 | 0.76 | -2.6 | |
2,715,237 | - | BWI76_RS13010 | 0.81 | +2.1 | |
2,715,401 | + | +1.2 | |||
2,715,759 | - | +0.1 | |||
2,715,800 | - | -0.9 | |||
2,715,900 | + | -2.3 | |||
2,715,905 | + | -1.1 | |||
2,715,908 | - | -1.0 | |||
2,715,910 | + | +0.9 | |||
2,715,918 | - | BWI76_RS13015 | 0.10 | +0.9 | |
2,715,974 | - | BWI76_RS13015 | 0.16 | -1.5 | |
2,715,979 | - | BWI76_RS13015 | 0.17 | +0.6 | |
2,716,020 | - | BWI76_RS13015 | 0.21 | -1.3 | |
2,716,046 | - | BWI76_RS13015 | 0.24 | -0.7 | |
2,716,054 | + | BWI76_RS13015 | 0.25 | -1.0 | |
2,716,238 | - | BWI76_RS13015 | 0.45 | +1.9 | |
2,716,688 | - | +1.4 | |||
2,716,728 | - | -0.6 | |||
2,717,120 | + | BWI76_RS13020 | 0.29 | -0.5 | |
2,717,144 | - | BWI76_RS13020 | 0.32 | +0.1 | |
2,717,359 | + | BWI76_RS13020 | 0.53 | -0.2 | |
2,717,457 | - | BWI76_RS13020 | 0.63 | -0.6 | |
2,717,654 | + | BWI76_RS13020 | 0.83 | -1.6 |
Or see this region's nucleotide sequence