Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09390
Experiment: KLEB17 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB17 MOI 1 |
---|---|---|---|---|---|
remove | |||||
1,969,478 | - | BWI76_RS09385 | 0.69 | -0.6 | |
1,969,623 | - | BWI76_RS09385 | 0.75 | +0.9 | |
1,969,623 | - | BWI76_RS09385 | 0.75 | +1.1 | |
1,969,717 | - | BWI76_RS09385 | 0.78 | -0.1 | |
1,970,375 | + | BWI76_RS09390 | 0.18 | -1.0 | |
1,970,560 | - | BWI76_RS09390 | 0.56 | -1.6 | |
1,970,642 | + | BWI76_RS09390 | 0.73 | -0.9 | |
1,970,698 | + | BWI76_RS09390 | 0.84 | +1.0 | |
1,970,770 | - | +1.4 | |||
1,970,812 | + | +2.3 | |||
1,971,182 | + | BWI76_RS09395 | 0.38 | +2.3 | |
1,971,190 | - | BWI76_RS09395 | 0.39 | +1.1 | |
1,971,309 | + | BWI76_RS09395 | 0.50 | +0.3 | |
1,971,311 | + | BWI76_RS09395 | 0.50 | -2.3 | |
1,971,574 | - | BWI76_RS09395 | 0.74 | -0.5 | |
1,971,617 | - | -0.4 | |||
1,971,657 | + | BWI76_RS09395 | 0.82 | +0.6 | |
1,971,684 | + | BWI76_RS09395 | 0.84 | -0.4 | |
1,971,713 | - | BWI76_RS09395 | 0.87 | -0.5 | |
1,971,745 | - | BWI76_RS09395 | 0.90 | +0.3 | |
1,971,755 | - | -1.9 |
Or see this region's nucleotide sequence