Experiment: KLEB17 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23410 and BWI76_RS23415 are separated by 18 nucleotides BWI76_RS23415 and BWI76_RS23420 are separated by 240 nucleotides
BWI76_RS23410: BWI76_RS23410 - glycosyl hydrolase family 32, at 4,882,504 to 4,883,937
_RS23410
BWI76_RS23415: BWI76_RS23415 - MFS transporter, at 4,883,956 to 4,885,197
_RS23415
BWI76_RS23420: BWI76_RS23420 - LacI family transcriptional regulator, at 4,885,438 to 4,886,433
_RS23420
Position (kb)
4883
4884
4885
4886 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4883.008 kb on - strand, within BWI76_RS23410 at 4883.109 kb on - strand, within BWI76_RS23410 at 4883.600 kb on + strand, within BWI76_RS23410 at 4883.600 kb on + strand, within BWI76_RS23410 at 4883.608 kb on - strand, within BWI76_RS23410 at 4883.760 kb on - strand, within BWI76_RS23410 at 4883.804 kb on + strand at 4883.998 kb on - strand at 4884.048 kb on - strand at 4884.067 kb on + strand at 4884.165 kb on + strand, within BWI76_RS23415 at 4884.165 kb on + strand, within BWI76_RS23415 at 4884.197 kb on - strand at 4884.239 kb on + strand, within BWI76_RS23415 at 4884.260 kb on - strand, within BWI76_RS23415 at 4884.270 kb on + strand, within BWI76_RS23415 at 4884.691 kb on + strand, within BWI76_RS23415 at 4884.812 kb on + strand, within BWI76_RS23415 at 4884.812 kb on + strand, within BWI76_RS23415 at 4884.820 kb on - strand, within BWI76_RS23415 at 4884.847 kb on + strand, within BWI76_RS23415 at 4884.899 kb on - strand, within BWI76_RS23415 at 4884.918 kb on - strand, within BWI76_RS23415 at 4884.964 kb on + strand, within BWI76_RS23415 at 4884.981 kb on + strand, within BWI76_RS23415 at 4884.996 kb on + strand, within BWI76_RS23415 at 4884.996 kb on + strand, within BWI76_RS23415 at 4884.996 kb on + strand, within BWI76_RS23415 at 4885.015 kb on - strand, within BWI76_RS23415 at 4885.058 kb on - strand, within BWI76_RS23415 at 4885.091 kb on - strand at 4885.115 kb on + strand at 4885.360 kb on + strand at 4885.506 kb on - strand at 4885.811 kb on + strand, within BWI76_RS23420 at 4885.853 kb on - strand, within BWI76_RS23420 at 4885.853 kb on - strand, within BWI76_RS23420 at 4885.932 kb on + strand, within BWI76_RS23420 at 4885.942 kb on + strand, within BWI76_RS23420 at 4886.087 kb on + strand, within BWI76_RS23420
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB17 MOI 1 remove 4,883,008 - BWI76_RS23410 0.35 -0.9 4,883,109 - BWI76_RS23410 0.42 -0.3 4,883,600 + BWI76_RS23410 0.76 +0.9 4,883,600 + BWI76_RS23410 0.76 +1.8 4,883,608 - BWI76_RS23410 0.77 -1.0 4,883,760 - BWI76_RS23410 0.88 +0.1 4,883,804 + -0.2 4,883,998 - -1.3 4,884,048 - -3.3 4,884,067 + +0.3 4,884,165 + BWI76_RS23415 0.17 -4.0 4,884,165 + BWI76_RS23415 0.17 -1.0 4,884,197 - +1.8 4,884,239 + BWI76_RS23415 0.23 +0.7 4,884,260 - BWI76_RS23415 0.24 -2.0 4,884,270 + BWI76_RS23415 0.25 -1.3 4,884,691 + BWI76_RS23415 0.59 -0.7 4,884,812 + BWI76_RS23415 0.69 -1.1 4,884,812 + BWI76_RS23415 0.69 -1.5 4,884,820 - BWI76_RS23415 0.70 -0.4 4,884,847 + BWI76_RS23415 0.72 -0.2 4,884,899 - BWI76_RS23415 0.76 -0.4 4,884,918 - BWI76_RS23415 0.77 +0.4 4,884,964 + BWI76_RS23415 0.81 +0.7 4,884,981 + BWI76_RS23415 0.83 +0.6 4,884,996 + BWI76_RS23415 0.84 -2.2 4,884,996 + BWI76_RS23415 0.84 -0.7 4,884,996 + BWI76_RS23415 0.84 +0.1 4,885,015 - BWI76_RS23415 0.85 -1.6 4,885,058 - BWI76_RS23415 0.89 -0.2 4,885,091 - -1.9 4,885,115 + -0.5 4,885,360 + -1.5 4,885,506 - +1.7 4,885,811 + BWI76_RS23420 0.37 +0.1 4,885,853 - BWI76_RS23420 0.42 -1.2 4,885,853 - BWI76_RS23420 0.42 -0.0 4,885,932 + BWI76_RS23420 0.50 +1.0 4,885,942 + BWI76_RS23420 0.51 -0.4 4,886,087 + BWI76_RS23420 0.65 -2.5
Or see this region's nucleotide sequence