Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20505

Experiment: KLEB17 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB17 MOI 1
4,293,338	+		BWI76_RS20500	0.45	+0.5
4,293,345	-		BWI76_RS20500	0.45	+3.0
4,293,563	-		BWI76_RS20500	0.58	+1.3
4,293,607	+		BWI76_RS20500	0.61	-2.7
4,293,607	+		BWI76_RS20500	0.61	-1.5
4,293,607	+		BWI76_RS20500	0.61	-3.5
4,293,614	-		BWI76_RS20500	0.61	-2.9
4,293,615	-		BWI76_RS20500	0.61	-0.2
4,293,615	-		BWI76_RS20500	0.61	-2.4
4,293,619	-		BWI76_RS20500	0.61	+0.1
4,293,621	+				-2.0
4,293,621	+		BWI76_RS20500	0.61	+0.5
4,293,621	+		BWI76_RS20500	0.61	+0.1
4,293,639	-		BWI76_RS20500	0.62	+1.8
4,293,639	-		BWI76_RS20500	0.62	-0.9
4,293,651	+		BWI76_RS20500	0.63	-1.4
4,293,661	-		BWI76_RS20500	0.64	-2.6
4,293,681	-		BWI76_RS20500	0.65	+0.8
4,293,681	-		BWI76_RS20500	0.65	-2.4
4,293,722	-		BWI76_RS20500	0.67	+0.8
4,293,788	-		BWI76_RS20500	0.71	-1.3
4,293,838	+		BWI76_RS20500	0.74	-0.6
4,293,882	+		BWI76_RS20500	0.77	-0.1
4,293,890	-		BWI76_RS20500	0.77	-0.3
4,293,890	-		BWI76_RS20500	0.77	-1.5
4,293,981	+		BWI76_RS20500	0.83	+0.3
4,294,020	+		BWI76_RS20500	0.85	-2.9
4,294,020	+		BWI76_RS20500	0.85	-0.9
4,294,020	+		BWI76_RS20500	0.85	-1.8
4,294,020	+		BWI76_RS20500	0.85	-0.6
4,294,020	+		BWI76_RS20500	0.85	-0.4
4,294,028	-		BWI76_RS20500	0.85	+1.8
4,294,028	-		BWI76_RS20500	0.85	-1.2
4,294,028	-		BWI76_RS20500	0.85	+0.2
4,294,073	+		BWI76_RS20500	0.88	-0.2
4,294,073	+				+2.6
4,294,081	-		BWI76_RS20500	0.88	-2.6
4,294,082	-		BWI76_RS20500	0.89	-3.2
4,294,098	+		BWI76_RS20500	0.89	+0.6
4,294,098	+		BWI76_RS20500	0.89	+0.3
4,294,098	+		BWI76_RS20500	0.89	-0.2
4,294,099	+		BWI76_RS20500	0.90	+0.9
4,294,106	-		BWI76_RS20500	0.90	-1.4
4,294,156	+				+0.4
4,294,160	+				-0.6
4,294,176	-				+0.8
4,294,181	-				-2.4
4,294,188	+				-3.6
4,294,242	+				-3.3
4,294,252	-				-2.4
4,294,254	+				+2.0
4,294,261	-				-0.1
4,294,391	+		BWI76_RS20505	0.14	-1.0
4,294,401	+		BWI76_RS20505	0.15	-0.5
4,294,469	+		BWI76_RS20505	0.24	-0.7
4,294,504	+		BWI76_RS20505	0.29	+0.1
4,294,549	+		BWI76_RS20505	0.35	-4.0
4,294,557	-		BWI76_RS20505	0.36	-1.2
4,294,557	-		BWI76_RS20505	0.36	-1.8
4,294,584	+		BWI76_RS20505	0.40	-0.0
4,294,591	-		BWI76_RS20505	0.41	-0.8
4,294,592	-		BWI76_RS20505	0.41	-1.4
4,294,593	-		BWI76_RS20505	0.41	-0.6
4,294,637	+		BWI76_RS20505	0.47	+0.4
4,294,659	+		BWI76_RS20505	0.50	+2.2
4,294,659	+		BWI76_RS20505	0.50	+0.9
4,294,659	+		BWI76_RS20505	0.50	-1.6
4,294,659	+		BWI76_RS20505	0.50	-0.5
4,294,667	-		BWI76_RS20505	0.51	-3.3
4,294,684	-		BWI76_RS20505	0.53	-0.5
4,294,727	-		BWI76_RS20505	0.59	-2.7
4,294,727	-		BWI76_RS20505	0.59	-4.1
4,294,895	+		BWI76_RS20505	0.82	-1.3
4,294,951	-		BWI76_RS20505	0.89	-2.8
4,294,951	-		BWI76_RS20505	0.89	+0.1
4,295,006	-				-0.8
4,295,337	+		BWI76_RS20510	0.27	-1.9
4,295,468	-		BWI76_RS20510	0.40	-0.1
4,295,492	-		BWI76_RS20510	0.43	-1.1
4,295,651	+		BWI76_RS20510	0.59	-0.7
4,295,723	+		BWI76_RS20510	0.67	-0.0
4,295,859	+		BWI76_RS20510	0.81	+0.4
4,295,859	-		BWI76_RS20510	0.81	-0.7
4,295,870	+		BWI76_RS20510	0.82	-1.6
4,295,882	+		BWI76_RS20510	0.83	-0.4
4,295,900	-		BWI76_RS20510	0.85	+0.1
4,295,910	-		BWI76_RS20510	0.86	-3.4