Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19775
Experiment: KLEB17 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB17 MOI 1 |
---|---|---|---|---|---|
remove | |||||
4,133,124 | - | +2.2 | |||
4,133,124 | - | -0.4 | |||
4,133,124 | - | -1.1 | |||
4,133,281 | + | +1.4 | |||
4,133,289 | - | -1.0 | |||
4,133,289 | - | -2.3 | |||
4,133,358 | + | BWI76_RS19770 | 0.11 | +0.9 | |
4,133,366 | - | BWI76_RS19770 | 0.12 | +1.6 | |
4,133,847 | + | -1.8 | |||
4,134,051 | + | -1.9 | |||
4,134,059 | - | -1.2 | |||
4,134,202 | + | -1.7 | |||
4,134,202 | + | -3.3 | |||
4,134,202 | + | +0.7 | |||
4,134,911 | + | BWI76_RS19775 | 0.55 | -1.7 | |
4,134,919 | - | BWI76_RS19775 | 0.55 | -1.3 | |
4,135,463 | - | +1.1 | |||
4,135,637 | + | -0.2 | |||
4,135,704 | + | -1.7 | |||
4,135,757 | - | +0.0 | |||
4,135,811 | - | +1.1 | |||
4,135,811 | - | -0.4 | |||
4,135,859 | - | +0.3 | |||
4,135,932 | + | BWI76_RS19780 | 0.14 | +1.6 | |
4,135,954 | - | BWI76_RS19780 | 0.15 | -1.2 | |
4,136,348 | + | BWI76_RS19780 | 0.37 | +0.7 | |
4,136,474 | + | BWI76_RS19780 | 0.44 | -0.8 |
Or see this region's nucleotide sequence