Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19135

Experiment: KLEB17 MOI 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19130 and BWI76_RS19135 are separated by 136 nucleotidesBWI76_RS19135 and BWI76_RS19140 are separated by 127 nucleotides BWI76_RS19130: BWI76_RS19130 - 3-methyladenine DNA glycosylase 2, at 3,976,972 to 3,977,820 _RS19130 BWI76_RS19135: BWI76_RS19135 - molecular chaperone, at 3,977,957 to 3,979,309 _RS19135 BWI76_RS19140: BWI76_RS19140 - citrate (Si)-synthase, at 3,979,437 to 3,980,723 _RS19140 Position (kb) 3977 3978 3979 3980Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3976.970 kb on - strandat 3977.038 kb on - strandat 3977.207 kb on - strand, within BWI76_RS19130at 3977.207 kb on - strand, within BWI76_RS19130at 3977.303 kb on - strand, within BWI76_RS19130at 3977.330 kb on + strand, within BWI76_RS19130at 3977.414 kb on - strand, within BWI76_RS19130at 3977.460 kb on - strand, within BWI76_RS19130at 3977.521 kb on - strand, within BWI76_RS19130at 3977.624 kb on - strand, within BWI76_RS19130at 3977.809 kb on - strandat 3977.854 kb on + strandat 3977.862 kb on - strandat 3978.346 kb on - strand, within BWI76_RS19135at 3978.508 kb on + strand, within BWI76_RS19135at 3978.717 kb on + strand, within BWI76_RS19135at 3978.946 kb on - strand, within BWI76_RS19135at 3978.993 kb on - strand, within BWI76_RS19135at 3979.128 kb on - strand, within BWI76_RS19135at 3979.230 kb on - strandat 3979.335 kb on + strandat 3979.363 kb on + strandat 3979.390 kb on + strandat 3979.391 kb on - strandat 3979.609 kb on + strand, within BWI76_RS19140at 3979.718 kb on - strand, within BWI76_RS19140at 3979.790 kb on + strand, within BWI76_RS19140at 3979.890 kb on - strand, within BWI76_RS19140at 3980.306 kb on + strand, within BWI76_RS19140

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Per-strain Table

Position Strand Gene LocusTag Fraction KLEB17 MOI 1
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3,976,970 - -0.1
3,977,038 - -1.3
3,977,207 - BWI76_RS19130 0.28 -2.0
3,977,207 - BWI76_RS19130 0.28 -1.6
3,977,303 - BWI76_RS19130 0.39 -0.9
3,977,330 + BWI76_RS19130 0.42 +1.9
3,977,414 - BWI76_RS19130 0.52 -2.4
3,977,460 - BWI76_RS19130 0.57 +1.1
3,977,521 - BWI76_RS19130 0.65 +0.0
3,977,624 - BWI76_RS19130 0.77 +0.3
3,977,809 - -1.8
3,977,854 + +0.5
3,977,862 - +2.2
3,978,346 - BWI76_RS19135 0.29 +0.1
3,978,508 + BWI76_RS19135 0.41 +0.7
3,978,717 + BWI76_RS19135 0.56 +0.4
3,978,946 - BWI76_RS19135 0.73 +1.1
3,978,993 - BWI76_RS19135 0.77 -0.4
3,979,128 - BWI76_RS19135 0.87 +1.3
3,979,230 - +1.1
3,979,335 + -0.4
3,979,363 + -0.2
3,979,390 + -0.7
3,979,391 - -1.5
3,979,609 + BWI76_RS19140 0.13 -1.8
3,979,718 - BWI76_RS19140 0.22 +1.3
3,979,790 + BWI76_RS19140 0.27 -3.3
3,979,890 - BWI76_RS19140 0.35 -1.1
3,980,306 + BWI76_RS19140 0.68 +0.9

Or see this region's nucleotide sequence