Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17970

Experiment: KLEB17 MOI 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS17965 and BWI76_RS17970 are separated by 74 nucleotidesBWI76_RS17970 and BWI76_RS17975 are separated by 236 nucleotides BWI76_RS17965: BWI76_RS17965 - MFS transporter, at 3,731,475 to 3,732,848 _RS17965 BWI76_RS17970: BWI76_RS17970 - zinc metalloprotease HtpX, at 3,732,923 to 3,733,804 _RS17970 BWI76_RS17975: BWI76_RS17975 - tail-specific protease, at 3,734,041 to 3,736,089 _RS17975 Position (kb) 3732 3733 3734Strain fitness (log2 ratio) -2 -1 0 1 2at 3732.158 kb on - strand, within BWI76_RS17965at 3732.243 kb on + strand, within BWI76_RS17965at 3732.774 kb on - strandat 3733.038 kb on - strand, within BWI76_RS17970at 3733.496 kb on + strand, within BWI76_RS17970at 3734.532 kb on + strand, within BWI76_RS17975at 3734.577 kb on + strand, within BWI76_RS17975at 3734.611 kb on - strand, within BWI76_RS17975

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Per-strain Table

Position Strand Gene LocusTag Fraction KLEB17 MOI 1
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3,732,158 - BWI76_RS17965 0.50 +0.3
3,732,243 + BWI76_RS17965 0.56 +0.1
3,732,774 - -0.3
3,733,038 - BWI76_RS17970 0.13 +1.6
3,733,496 + BWI76_RS17970 0.65 -0.3
3,734,532 + BWI76_RS17975 0.24 -2.2
3,734,577 + BWI76_RS17975 0.26 +2.0
3,734,611 - BWI76_RS17975 0.28 -1.2

Or see this region's nucleotide sequence