Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17510

Experiment: KLEB17 MOI 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS17505 and BWI76_RS17510 are separated by 63 nucleotidesBWI76_RS17510 and BWI76_RS17515 are separated by 50 nucleotides BWI76_RS17505: BWI76_RS17505 - PLP-dependent lyase/thiolase, at 3,629,898 to 3,631,097 _RS17505 BWI76_RS17510: BWI76_RS17510 - selenium metabolism hydrolase, at 3,631,161 to 3,632,372 _RS17510 BWI76_RS17515: BWI76_RS17515 - dihydropyrimidinase, at 3,632,423 to 3,633,829 _RS17515 Position (kb) 3631 3632 3633Strain fitness (log2 ratio) -2 -1 0 1 2at 3630.207 kb on - strand, within BWI76_RS17505at 3630.556 kb on - strand, within BWI76_RS17505at 3630.686 kb on + strand, within BWI76_RS17505at 3630.694 kb on + strand, within BWI76_RS17505at 3630.739 kb on - strand, within BWI76_RS17505at 3630.775 kb on - strand, within BWI76_RS17505at 3630.894 kb on - strand, within BWI76_RS17505at 3630.894 kb on - strand, within BWI76_RS17505at 3631.040 kb on - strandat 3631.042 kb on + strandat 3631.146 kb on - strandat 3631.498 kb on + strand, within BWI76_RS17510at 3631.631 kb on + strand, within BWI76_RS17510at 3632.060 kb on + strand, within BWI76_RS17510at 3632.070 kb on + strand, within BWI76_RS17510at 3632.070 kb on + strand, within BWI76_RS17510at 3632.078 kb on - strand, within BWI76_RS17510at 3632.182 kb on + strandat 3632.354 kb on - strandat 3632.799 kb on + strand, within BWI76_RS17515at 3632.876 kb on - strand, within BWI76_RS17515at 3633.047 kb on - strand, within BWI76_RS17515at 3633.173 kb on - strandat 3633.284 kb on + strand, within BWI76_RS17515at 3633.354 kb on + strand, within BWI76_RS17515

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Per-strain Table

Position Strand Gene LocusTag Fraction KLEB17 MOI 1
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3,630,207 - BWI76_RS17505 0.26 +1.3
3,630,556 - BWI76_RS17505 0.55 -0.4
3,630,686 + BWI76_RS17505 0.66 +0.2
3,630,694 + BWI76_RS17505 0.66 +0.0
3,630,739 - BWI76_RS17505 0.70 -1.7
3,630,775 - BWI76_RS17505 0.73 +0.8
3,630,894 - BWI76_RS17505 0.83 +1.0
3,630,894 - BWI76_RS17505 0.83 -0.0
3,631,040 - -0.9
3,631,042 + +1.2
3,631,146 - +0.4
3,631,498 + BWI76_RS17510 0.28 -0.9
3,631,631 + BWI76_RS17510 0.39 +1.4
3,632,060 + BWI76_RS17510 0.74 -1.0
3,632,070 + BWI76_RS17510 0.75 -2.7
3,632,070 + BWI76_RS17510 0.75 -0.6
3,632,078 - BWI76_RS17510 0.76 -2.1
3,632,182 + -0.8
3,632,354 - +0.4
3,632,799 + BWI76_RS17515 0.27 +0.6
3,632,876 - BWI76_RS17515 0.32 +1.1
3,633,047 - BWI76_RS17515 0.44 +1.0
3,633,173 - +1.8
3,633,284 + BWI76_RS17515 0.61 -0.1
3,633,354 + BWI76_RS17515 0.66 +0.8

Or see this region's nucleotide sequence