Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15650
Experiment: KLEB17 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB17 MOI 1 |
---|---|---|---|---|---|
remove | |||||
3,269,615 | - | -1.3 | |||
3,269,616 | + | -1.3 | |||
3,269,822 | + | BWI76_RS15645 | 0.24 | -1.0 | |
3,269,978 | + | BWI76_RS15645 | 0.41 | -1.4 | |
3,270,003 | + | BWI76_RS15645 | 0.43 | -0.5 | |
3,270,065 | - | BWI76_RS15645 | 0.50 | +0.2 | |
3,270,128 | - | BWI76_RS15645 | 0.57 | -2.2 | |
3,270,207 | + | BWI76_RS15645 | 0.65 | -0.4 | |
3,270,207 | + | BWI76_RS15645 | 0.65 | +0.5 | |
3,270,454 | - | -0.7 | |||
3,270,507 | + | -1.0 | |||
3,270,612 | + | -1.1 | |||
3,270,771 | - | BWI76_RS15650 | 0.21 | -3.6 | |
3,271,112 | + | BWI76_RS15650 | 0.46 | +1.7 | |
3,271,293 | + | BWI76_RS15650 | 0.60 | -2.9 | |
3,271,323 | - | BWI76_RS15650 | 0.62 | -1.2 | |
3,271,383 | - | BWI76_RS15650 | 0.66 | -2.7 | |
3,272,277 | + | BWI76_RS15655 | 0.29 | -2.7 | |
3,272,345 | - | BWI76_RS15655 | 0.33 | -2.6 | |
3,272,599 | - | BWI76_RS15655 | 0.51 | -2.4 | |
3,272,599 | - | BWI76_RS15655 | 0.51 | +0.7 | |
3,272,633 | - | BWI76_RS15655 | 0.53 | -1.7 |
Or see this region's nucleotide sequence