Experiment: KLEB17 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11485 and BWI76_RS11490 are separated by 426 nucleotides BWI76_RS11490 and BWI76_RS11495 are separated by 92 nucleotides
BWI76_RS11485: BWI76_RS11485 - serine protein kinase PrkA, at 2,417,352 to 2,419,286
_RS11485
BWI76_RS11490: BWI76_RS11490 - MltA-interacting protein MipA, at 2,419,713 to 2,420,459
_RS11490
BWI76_RS11495: BWI76_RS11495 - hypothetical protein, at 2,420,552 to 2,421,406
_RS11495
Position (kb)
2419
2420
2421 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2418.905 kb on + strand, within BWI76_RS11485 at 2418.905 kb on + strand, within BWI76_RS11485 at 2418.921 kb on - strand, within BWI76_RS11485 at 2419.179 kb on + strand at 2419.316 kb on + strand at 2419.324 kb on - strand at 2419.375 kb on + strand at 2419.400 kb on - strand at 2419.400 kb on - strand at 2419.400 kb on - strand at 2419.582 kb on + strand at 2419.667 kb on + strand at 2419.709 kb on - strand at 2419.760 kb on + strand at 2419.792 kb on + strand, within BWI76_RS11490 at 2420.053 kb on + strand, within BWI76_RS11490 at 2420.199 kb on + strand, within BWI76_RS11490 at 2420.228 kb on + strand, within BWI76_RS11490 at 2420.306 kb on + strand, within BWI76_RS11490 at 2420.376 kb on - strand, within BWI76_RS11490 at 2420.444 kb on + strand at 2420.452 kb on - strand at 2421.080 kb on - strand, within BWI76_RS11495 at 2421.333 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB17 MOI 1 remove 2,418,905 + BWI76_RS11485 0.80 +0.3 2,418,905 + BWI76_RS11485 0.80 +1.2 2,418,921 - BWI76_RS11485 0.81 -3.8 2,419,179 + -0.8 2,419,316 + -0.5 2,419,324 - -0.1 2,419,375 + -1.7 2,419,400 - -1.0 2,419,400 - +0.7 2,419,400 - +1.4 2,419,582 + +0.6 2,419,667 + +0.1 2,419,709 - -1.2 2,419,760 + -1.4 2,419,792 + BWI76_RS11490 0.11 -2.9 2,420,053 + BWI76_RS11490 0.46 +0.2 2,420,199 + BWI76_RS11490 0.65 +0.1 2,420,228 + BWI76_RS11490 0.69 -1.0 2,420,306 + BWI76_RS11490 0.79 -1.4 2,420,376 - BWI76_RS11490 0.89 -0.3 2,420,444 + +0.3 2,420,452 - -2.6 2,421,080 - BWI76_RS11495 0.62 -1.4 2,421,333 + -1.4
Or see this region's nucleotide sequence