Experiment: KLEB17 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11035 and BWI76_RS11040 are separated by 35 nucleotides BWI76_RS11040 and BWI76_RS11045 are separated by 307 nucleotides BWI76_RS11045 and BWI76_RS11050 are separated by 189 nucleotides
BWI76_RS11035: BWI76_RS11035 - putative LysR-family transcriptional regulator, at 2,327,538 to 2,328,473
_RS11035
BWI76_RS11040: BWI76_RS11040 - ribonuclease E, at 2,328,509 to 2,331,757
_RS11040
BWI76_RS11045: BWI76_RS11045 - hypothetical protein, at 2,332,065 to 2,332,223
_RS11045
BWI76_RS11050: BWI76_RS11050 - 23S rRNA pseudouridine(955/2504/2580) synthase, at 2,332,413 to 2,333,408
_RS11050
Position (kb)
2328
2329
2330
2331
2332 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2327.590 kb on + strand at 2327.975 kb on - strand, within BWI76_RS11035 at 2328.121 kb on + strand, within BWI76_RS11035 at 2328.790 kb on + strand at 2329.150 kb on - strand, within BWI76_RS11040 at 2329.743 kb on - strand, within BWI76_RS11040 at 2332.246 kb on - strand at 2332.334 kb on - strand at 2332.375 kb on + strand at 2332.420 kb on + strand at 2332.541 kb on + strand, within BWI76_RS11050 at 2332.547 kb on - strand, within BWI76_RS11050 at 2332.547 kb on - strand, within BWI76_RS11050 at 2332.549 kb on - strand, within BWI76_RS11050 at 2332.549 kb on - strand, within BWI76_RS11050 at 2332.585 kb on + strand, within BWI76_RS11050 at 2332.699 kb on + strand, within BWI76_RS11050
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB17 MOI 1 remove 2,327,590 + +0.1 2,327,975 - BWI76_RS11035 0.47 -1.9 2,328,121 + BWI76_RS11035 0.62 +1.1 2,328,790 + +1.6 2,329,150 - BWI76_RS11040 0.20 -1.4 2,329,743 - BWI76_RS11040 0.38 +2.0 2,332,246 - +0.0 2,332,334 - +0.7 2,332,375 + +0.7 2,332,420 + -2.3 2,332,541 + BWI76_RS11050 0.13 -0.4 2,332,547 - BWI76_RS11050 0.13 -1.5 2,332,547 - BWI76_RS11050 0.13 -2.7 2,332,549 - BWI76_RS11050 0.14 -1.2 2,332,549 - BWI76_RS11050 0.14 +0.6 2,332,585 + BWI76_RS11050 0.17 +0.8 2,332,699 + BWI76_RS11050 0.29 -0.8
Or see this region's nucleotide sequence