Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11000
Experiment: KLEB17 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB17 MOI 1 |
---|---|---|---|---|---|
remove | |||||
2,319,372 | + | -0.9 | |||
2,319,431 | + | -1.5 | |||
2,319,761 | + | BWI76_RS10995 | 0.47 | +0.1 | |
2,319,769 | - | BWI76_RS10995 | 0.48 | -0.6 | |
2,319,838 | - | BWI76_RS10995 | 0.60 | +1.0 | |
2,319,947 | - | BWI76_RS10995 | 0.80 | -0.3 | |
2,319,989 | + | BWI76_RS10995 | 0.87 | +0.2 | |
2,320,007 | + | +0.7 | |||
2,320,007 | - | +1.5 | |||
2,320,020 | - | +1.0 | |||
2,320,176 | + | -0.3 | |||
2,320,363 | - | +2.0 | |||
2,320,363 | - | BWI76_RS11000 | 0.26 | -0.6 | |
2,320,742 | + | BWI76_RS11000 | 0.84 | -0.5 | |
2,320,744 | + | BWI76_RS11000 | 0.85 | -1.7 | |
2,320,761 | + | BWI76_RS11000 | 0.87 | -1.3 | |
2,320,808 | - | +1.7 | |||
2,321,119 | - | BWI76_RS11005 | 0.17 | -1.1 | |
2,321,203 | - | BWI76_RS11005 | 0.24 | -0.7 | |
2,321,340 | - | BWI76_RS11005 | 0.36 | +0.4 | |
2,321,683 | - | BWI76_RS11005 | 0.64 | -0.4 | |
2,321,731 | - | BWI76_RS11005 | 0.68 | -0.1 | |
2,321,737 | + | BWI76_RS11005 | 0.69 | +1.1 |
Or see this region's nucleotide sequence