Experiment: KLEB17 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09485 and BWI76_RS09490 are separated by 78 nucleotides BWI76_RS09490 and BWI76_RS09495 overlap by 4 nucleotides BWI76_RS09495 and BWI76_RS09500 are separated by 217 nucleotides
BWI76_RS09485: BWI76_RS09485 - 23S rRNA (uracil(747)-C(5))-methyltransferase, at 1,985,319 to 1,986,449
_RS09485
BWI76_RS09490: BWI76_RS09490 - DNA-binding response regulator, at 1,986,528 to 1,987,244
_RS09490
BWI76_RS09495: BWI76_RS09495 - sensor histidine kinase, at 1,987,241 to 1,988,713
_RS09495
BWI76_RS09500: BWI76_RS09500 - arginine ABC transporter substrate-binding protein, at 1,988,931 to 1,989,662
_RS09500
Position (kb) 1987
1988
1989 Strain fitness (log2 ratio) -1
0
1
2 at 1986.350 kb on - strand at 1986.420 kb on + strand at 1986.548 kb on + strand at 1986.970 kb on + strand, within BWI76_RS09490 at 1986.970 kb on + strand, within BWI76_RS09490 at 1987.433 kb on - strand, within BWI76_RS09495 at 1987.593 kb on - strand, within BWI76_RS09495 at 1987.641 kb on + strand, within BWI76_RS09495 at 1987.649 kb on - strand, within BWI76_RS09495 at 1987.783 kb on + strand, within BWI76_RS09495 at 1987.843 kb on - strand, within BWI76_RS09495 at 1987.910 kb on - strand, within BWI76_RS09495 at 1988.095 kb on - strand, within BWI76_RS09495 at 1989.346 kb on + strand, within BWI76_RS09500 at 1989.354 kb on - strand at 1989.493 kb on + strand, within BWI76_RS09500
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB17 MOI 1 remove 1,986,350 - -1.6 1,986,420 + +0.4 1,986,548 + -0.2 1,986,970 + BWI76_RS09490 0.62 +0.7 1,986,970 + BWI76_RS09490 0.62 -0.4 1,987,433 - BWI76_RS09495 0.13 -1.5 1,987,593 - BWI76_RS09495 0.24 -0.0 1,987,641 + BWI76_RS09495 0.27 -0.5 1,987,649 - BWI76_RS09495 0.28 -0.1 1,987,783 + BWI76_RS09495 0.37 -0.1 1,987,843 - BWI76_RS09495 0.41 +0.8 1,987,910 - BWI76_RS09495 0.45 -0.4 1,988,095 - BWI76_RS09495 0.58 -1.3 1,989,346 + BWI76_RS09500 0.57 +0.9 1,989,354 - +2.1 1,989,493 + BWI76_RS09500 0.77 +0.2
Or see this region's nucleotide sequence