Experiment: KLEB17 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07805 and BWI76_RS07810 are separated by 20 nucleotides BWI76_RS07810 and BWI76_RS07815 overlap by 4 nucleotides
BWI76_RS07805: BWI76_RS07805 - sugar ABC transporter permease, at 1,654,495 to 1,655,493
_RS07805
BWI76_RS07810: BWI76_RS07810 - sugar ABC transporter periplasmic sugar-binding protein, at 1,655,514 to 1,656,578
_RS07810
BWI76_RS07815: BWI76_RS07815 - hypothetical protein, at 1,656,575 to 1,657,816
_RS07815
Position (kb)
1655
1656
1657 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1654.821 kb on - strand, within BWI76_RS07805 at 1654.838 kb on - strand, within BWI76_RS07805 at 1655.123 kb on - strand, within BWI76_RS07805 at 1655.560 kb on - strand at 1655.888 kb on - strand, within BWI76_RS07810 at 1655.888 kb on - strand, within BWI76_RS07810 at 1655.956 kb on - strand, within BWI76_RS07810 at 1656.128 kb on + strand, within BWI76_RS07810 at 1656.194 kb on + strand, within BWI76_RS07810 at 1656.219 kb on - strand, within BWI76_RS07810 at 1656.337 kb on + strand, within BWI76_RS07810 at 1656.591 kb on + strand at 1656.599 kb on - strand at 1656.619 kb on + strand at 1656.644 kb on + strand at 1656.669 kb on - strand at 1656.920 kb on - strand, within BWI76_RS07815 at 1657.029 kb on - strand, within BWI76_RS07815 at 1657.270 kb on - strand, within BWI76_RS07815 at 1657.318 kb on + strand, within BWI76_RS07815 at 1657.363 kb on - strand, within BWI76_RS07815
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB17 MOI 1 remove 1,654,821 - BWI76_RS07805 0.33 -0.2 1,654,838 - BWI76_RS07805 0.34 +0.8 1,655,123 - BWI76_RS07805 0.63 -0.4 1,655,560 - +0.8 1,655,888 - BWI76_RS07810 0.35 +1.0 1,655,888 - BWI76_RS07810 0.35 -1.9 1,655,956 - BWI76_RS07810 0.42 +1.5 1,656,128 + BWI76_RS07810 0.58 +1.3 1,656,194 + BWI76_RS07810 0.64 -0.0 1,656,219 - BWI76_RS07810 0.66 +1.7 1,656,337 + BWI76_RS07810 0.77 +0.7 1,656,591 + +1.3 1,656,599 - -0.1 1,656,619 + -2.7 1,656,644 + +0.7 1,656,669 - -3.4 1,656,920 - BWI76_RS07815 0.28 +0.2 1,657,029 - BWI76_RS07815 0.37 +1.5 1,657,270 - BWI76_RS07815 0.56 +0.0 1,657,318 + BWI76_RS07815 0.60 +0.9 1,657,363 - BWI76_RS07815 0.63 +0.1
Or see this region's nucleotide sequence