Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05480
Experiment: KLEB17 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB17 MOI 1 |
---|---|---|---|---|---|
remove | |||||
1,149,270 | + | -1.4 | |||
1,150,067 | + | BWI76_RS05480 | 0.16 | -0.5 | |
1,150,068 | + | BWI76_RS05480 | 0.16 | -1.6 | |
1,150,076 | - | BWI76_RS05480 | 0.17 | -3.0 | |
1,150,252 | - | BWI76_RS05480 | 0.40 | -0.7 | |
1,150,474 | - | BWI76_RS05480 | 0.69 | -2.1 | |
1,151,107 | + | BWI76_RS05485 | 0.58 | +0.0 | |
1,151,179 | - | BWI76_RS05485 | 0.67 | -4.1 | |
1,151,179 | - | BWI76_RS05485 | 0.67 | -1.4 | |
1,151,186 | + | BWI76_RS05485 | 0.68 | -0.3 | |
1,151,214 | + | BWI76_RS05485 | 0.72 | -3.3 | |
1,151,284 | + | BWI76_RS05485 | 0.82 | -1.3 | |
1,151,299 | + | BWI76_RS05485 | 0.84 | -0.4 | |
1,151,341 | - | BWI76_RS05485 | 0.89 | -0.4 | |
1,151,518 | - | -0.6 | |||
1,151,699 | + | -0.2 | |||
1,151,707 | - | -0.4 | |||
1,151,707 | - | +0.9 | |||
1,151,707 | - | -1.8 | |||
1,151,707 | - | +0.5 |
Or see this region's nucleotide sequence